| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1463 |
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| Symbol | |
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| ID | 8419292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1692664 |
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| End bp | 1693344 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038038 |
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| Product | siroheme synthase |
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| Protein accession | YP_003198328 |
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| Protein GI | 258405586 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.438897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.104649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTATT ACCCTGTCTT TTTCGATATC GCGAACGCAC GGTGCCTCGT CCTCGGCGCC
GGCGGGGTCG GGCGCCGCAA GGCCCGCACA TTGCTTTCAG CCGGGGCGCA TGTCATCCTG
GTCGATCCCT TCAGTGCCCC TGACGAAGAC CCGGAACTGG CCGCAACGCC GGGGTTGAGC
TGGTACTCAC GCGACCTCAG CGATGCTGAT CTCGACGGCG TGGTCCTGGC TTTTGCCGCC
AGCGGCAACC GGGAAGCAAA CGGAGCCCTT GTCAACCGCT GCCGGGAACG CAATATCCCC
TGCAACGTAG CAGACAAGCC CGAAGACGGC ACCTTCATCC TCCCGGCGGT CCATTGTCAG
GAGGATCTCG TCCTGGCCGT CTCCACTGGA GGCGCCAGTC CGGCTCTCGC CCGGCATGCC
CGGCAGAAGC TGGAAGCCTC CTTCGGCCGG GAATACGCCG TCTTGTGTCG CCTGCTTGGC
TACCTCCGGC CCTTGGTTCT GGGCTTGAAA CTGTCCCAGC CGGAAAACCG GGACATTTTC
CGCTCCCTGG TGGACGAGGA GCTCCTGGAC GCCCTGCGCG ACAGAGACTG GACAAAATGC
GAAAATTCCC TCAAAGCACG TCTACCCCAA GCACTCCACC AGCACGTAGG AGACTTGTAT
GCCTTTTATA AGGACCTTTG A
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| Protein sequence | MRYYPVFFDI ANARCLVLGA GGVGRRKART LLSAGAHVIL VDPFSAPDED PELAATPGLS
WYSRDLSDAD LDGVVLAFAA SGNREANGAL VNRCRERNIP CNVADKPEDG TFILPAVHCQ
EDLVLAVSTG GASPALARHA RQKLEASFGR EYAVLCRLLG YLRPLVLGLK LSQPENRDIF
RSLVDEELLD ALRDRDWTKC ENSLKARLPQ ALHQHVGDLY AFYKDL
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