| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1457 |
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| Symbol | leuD |
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| ID | 8419286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1685946 |
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| End bp | 1686449 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038032 |
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| Product | 3-isopropylmalate dehydratase small subunit |
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| Protein accession | YP_003198322 |
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| Protein GI | 258405580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.376362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.219232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTATA CAGGTAAGGT TCATAAGGTT GGAGCCCATA TCGATACCGA TGCCATTATT
CCGGCCCGCT ATCTGGTGAC CGCCGATCCC GAAGAATTGG GGGTCCATTG CATGGCCGGG
TTGGAAGAGA ACTGGATTGA TCGGGTCAAC AAGGGCGATA TCATCGTTGG CGGTCCGAAC
TTCGGTTGTG GGTCATCTCG GGAGCACGCC CCTCTGGCCA TACTTGGCGC GGGGATTCCA
GTGGTGGTCG CACACAGTTT CGCCCGTATT TTCTATCGTA ACGGGTTCAA TATGGGACTG
CCGCTTTTGG AGGTCGGTGA CGCCGTGGAA CGGATCAGCG ACGGCGACAC CCTGACCGTG
GACGTCCAGC AAGGGACGGT GACCAATGCA ACAACAGGCG ACGTCATCAC CTGTCCTCCT
GTGCCGGAGT TCATGCAGGA ACTGCTGGCC AAGGGGGGGC TTATCCCCTA CGTTCGAGAC
CGGTTGCAGA GCGCCGGGGC ATAA
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| Protein sequence | MHYTGKVHKV GAHIDTDAII PARYLVTADP EELGVHCMAG LEENWIDRVN KGDIIVGGPN
FGCGSSREHA PLAILGAGIP VVVAHSFARI FYRNGFNMGL PLLEVGDAVE RISDGDTLTV
DVQQGTVTNA TTGDVITCPP VPEFMQELLA KGGLIPYVRD RLQSAGA
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