| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1452 |
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| Symbol | |
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| ID | 8419281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1682067 |
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| End bp | 1682540 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038027 |
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| Product | Protein-tyrosine phosphatase, low molecular weight |
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| Protein accession | YP_003198317 |
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| Protein GI | 258405575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | [TIGR02691] arsenate reductase (thioredoxin) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00327918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.121343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATAACG TCTTGTTTAT TTGCGTCCAC AACAGCGCCC GGAGCCAGAT GGCCGAAGCG
TATCTGCGCC AGGTCGCCGG TACAAATGTC CGGGTCACCA GCGCCGGATT CGAGCCCACG
ACTCTCAACC CCCTGGTTGT CGAAGTCATG CACGAAGAGG GAATCGATCT GAGCGACAAA
ACGACACAAT CTGTTTTTGA ATTATTCAAA AACGGTGCCA TCTTCACCCA CGTCATCACG
GTCTGCGACG ACAGCCGCGA AGGACAATGC CCGATCTATC CCGGCGTCAC GCACCGCCTG
CACCTCCCGT TCCCGGACCC GGCCGCGGTC ACCGGCACCC ACGAAGAACA ACGCCAGGCC
GTTCGCGAAA TCCGCGACAC GATCAAAGCC GCAGTCCAGG AATTTGCTGA CTGGCTCGAC
AGCGACACCC AAAGGTCTCT TTCCCCGTCC TGGCAGCGGT TGCCTCAGCG TTGA
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| Protein sequence | MHNVLFICVH NSARSQMAEA YLRQVAGTNV RVTSAGFEPT TLNPLVVEVM HEEGIDLSDK
TTQSVFELFK NGAIFTHVIT VCDDSREGQC PIYPGVTHRL HLPFPDPAAV TGTHEEQRQA
VREIRDTIKA AVQEFADWLD SDTQRSLSPS WQRLPQR
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