| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1451 |
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| Symbol | |
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| ID | 8419280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1680924 |
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| End bp | 1681763 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645038026 |
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| Product | glutamate racemase |
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| Protein accession | YP_003198316 |
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| Protein GI | 258405574 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00367617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.1291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGG AGCAAAATGC GACATCGCCA ATGGAGGGTG GTATTGGGGT CTTTGATTCT
GGAGTGGGCG GCCTTTCGGT CCTGAAGGAG ATCGACCGTG TTCTGCCCCA TGAAGATCTG
TGGTATGTGG CCGACTCGGC CGAAGCCCCG TACGGCGAAA AAAGCGAAGA AGAGATCCGG
CAACGTTCGC TGGAATTAGC CCGTTTCCTG GTCCAGCGAG GGGCCAAGGC GCTGGTGATT
GCCTGCAATA CGGCGACTGC CGCGGCCGCC GAGGAATTGC GTGCCCAATG CCCGGTGCCG
GTGGTGGCGG TGGAGCCGGC GGTCAAACCT GCGGTGGCCC TGTCCTGCTC GGGGTGCATC
GGGGTCCTGG CCACGACTGG GACATTGCAG AGCAAACGGT TTCAGGCGCT TTTGAAGCGG
TATGCCGGGT CAGCCGAAGT CGCGGTCCAG GCGTGCCCGG GATTGGTGGA GCGCGTGGAG
ATGGGCGACC TGGACGGTCC GGTGACACGG GTGCTTTTGG GCAGCTATGT CCAGGCCCTT
GCCGAACGGG GCGCGGACAC CCTCGTGCTG GGCTGTACCC ATTATCCGTT TTTGCGGCCG
CTGGTGCGCG ATTGCATCGG AGAGACCATG CCGGTTCTGG ATACCGGCCT GGCTGTGGCG
CGGCACCTGC ACAGCGAACT CAGACGCCTG GAGCTGGAAC GGCCTGCGGC GCGTCAGGGG
CAGCGGCGGT TTTGGACCAC CGGAGAGCCC GCCCGGTGTG AAAGCGTCCT CGGTCGGCTC
TGGGGGCGGG GAGCGATCGT TGTGGAACAT ATCGCCCCGC GTCCACTGTC GTTGTTGTGA
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| Protein sequence | MQVEQNATSP MEGGIGVFDS GVGGLSVLKE IDRVLPHEDL WYVADSAEAP YGEKSEEEIR
QRSLELARFL VQRGAKALVI ACNTATAAAA EELRAQCPVP VVAVEPAVKP AVALSCSGCI
GVLATTGTLQ SKRFQALLKR YAGSAEVAVQ ACPGLVERVE MGDLDGPVTR VLLGSYVQAL
AERGADTLVL GCTHYPFLRP LVRDCIGETM PVLDTGLAVA RHLHSELRRL ELERPAARQG
QRRFWTTGEP ARCESVLGRL WGRGAIVVEH IAPRPLSLL
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