| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1429 |
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| Symbol | |
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| ID | 8419258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1660623 |
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| End bp | 1663100 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038004 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_003198294 |
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| Protein GI | 258405552 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.067641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0902926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT CTGAGGTATA TATCCTGGAC CCCACCACCG GCCAGCTGGC AGCCTCGGAA
GACGACAGCC AGGGAGGAAC AACCCACGCT GTGATCCAGA AAACCAACGG CGACGACGAG
CACTCCCTGG ATGAAATCCC TGAAACCCTG CCTTTGCTGG CAGTACGGGA CATCGTCGTT
TTTAATTACA TGATTCTGCC CCTGTTCGTG GGGCGGGACA AATCCGTCAA ATCTGTGGAG
GCCTCGCTCA ACGACAGCCG GTACATTTTC ATCGCCACCC AGCGCGACGA AAAAAACGAC
GACCCCGGTC CTGAGGATCT CTATGAGATC GGCACCGTCG GCCTGATCAT GCGCATGCTC
AAAATGCCCG ACGGCCGTCT CAAAGTGCTG GTCCAGGGGG TTTCGCGGGC CAGGATCAAA
CAGTTCACGC AACACGACCC GCACCACCAG GTCGAGGTCG AGCTGATTGC CGAAGCCGAA
ACGCCGGAAA TCACCCCGGA TGTCGAAGCC CTGATGCGTT CGGCCCGCGA GCAGAGCGAA
GAGATCATCT CCCTGCGCGG CATCGACGCC TCGGAAATCA TGTCCGTACT GAATAACGTC
GACGAACCGG GCCGCCTGGC CGATCTGATC GCCTCGAACC TGCGCATGAA GACTGAGCAC
GCCCAGTCCA TCCTCGAATG CCAGGATCCC ATCGAACGGC TGTCCCTGGT CAACAAACAG
CTCTTGAACG AGGTGGAAAT CGCCTCCATG CAGGCCAAGA TCCAGAATAT GGCCAAAGAG
GGCATGGACA AGGCCCAAAA AGAGTTTTTC CTGCGCGAAC AACTCAAGGC TATCCGCTCC
GAGTTGGGCG AAGGCGCGGA TGTGGACGAA GAGTTTGAGG AGCTGCGCGA GGCACTGGAC
AAAGCCGGTC TGTCCAAGGA CGTCAAAAAA GAGGCCGACA AACAGCTCAA GCGCTTGGAA
TCCATGCACC CCGAATCCTC GGAAGCCACA GTCATCCGGA CCTATCTGGA ATGGCTCGTT
GAACTGCCGT GGAAAAAGAC CTCCAAGGAC CGCCTGGACA TCAAGCAGGC CGAGAAAATC
CTCAATGAGG ACCACTACGA CCTGCAGAAG GTCAAGGAAC GCATCCTGGA ATACCTCTCG
GTGCGCAAAC TCAATCCGAA GATGAAGGGG CCGATCCTCT GCTTTGTCGG CCCTCCCGGC
GTGGGGAAAA CCTCCCTGGG CCGTTCCATT GCCCGGTCGT TGAACCGGAA ATTCGAACGC
ATGTCCCTCG GCGGCATGCG CGACGAGGCC GAAATCCGCG GCCACCGGAG GACCTATATC
GGCTCCATGC CCGGGCGCAT TATCCAGGGC ATTAAAAACG CCGGCACCCG CAACCCGGTC
TTCATGCTCG ATGAGATCGA TAAGGTCGGC AACGACTTTC GCGGCGACCC CTCGTCGGCG
CTGCTGGAAG TCCTGGACCC GGAGCAGAAT TATTCCTTCA CCGACCACTA CCTGAACGTG
CCCTTCGACC TCTCCAAGGT CATGTTCATC TGCACCGCGA ACATGTTGGA CACCATTCCT
TCGGCCCTTC TGGACCGCAT GGAAGTCATC CGCTTGCCCG GCTACACCGA GCAGGAAAAG
GTTCGCATCG CCCGGCGCTA TCTCCTGCCA CGGCAGATCA AGGAAAACGG GCTCAAAGAG
GAATGGGTCA AAATCAGCGA CAACACCATC TCCCAAATCA TCCGCGACTA CACCCGGGAA
GCCGGTTTAC GGAACCTGGA ACGGGAGATC GGATCGGTTT GCCGCAAGAT GACCCGCAAG
GTCGCTGAGG GCAAAGAAGG CCCCTTCCGG GTCACACCGC AAAACCTCTC CAAATACCTG
GGCGTGCCGC CCTATCAGGA AGACGAGAGG GAACTGGAAC TGCCCCCCGG CGTCGCCGTC
GGCCTGGCCT GGACCCCGGC CGGAGGAGAA ATCATGCACG TCGAGGTCAC GCCCATGCCT
GGCAAGGGCA AACTGACCCT GACCGGACAA CTCGGGGAAG TGATGAAGGA AAGCGCCAAG
GCTGCGCTCA GCTACGCCCG CAGTCGGGCT GAGAAACTCG GTCTGGACCA CGACTTTGCC
GATAAAAAGG ATCTGCATAT CCACGTGCCG GCCGGTGCCA CGCCCAAGGA CGGCCCCTCC
GCCGGGGTCA CCCTGGTCAC GGCCGTACTC TCGGCCCTGA CTGAGACGCC GATCCGGCCC
GATGTGGCCA TGACCGGGGA AATCACTCTG CGCGGCCGGG TCCTCCCGGT CGGCGGGATC
AAAGAAAAGA TCCTTGCCGC TGTAGCCGCC GGAATGCGCA CGGTGATCAT CCCGGCCCGC
AACGAGAAGG ACTTCAAGGA GATCCCTTCC GAATTGCGCC GGAATATCAA GATCCATACT
GTAGAAAGTA TCGACGAGAT CTGGCCCCTG GTCCAGCAGG TCAGCGGACC GGACACCGAA
TCGAACGGTG AAAAATAA
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| Protein sequence | MSTSEVYILD PTTGQLAASE DDSQGGTTHA VIQKTNGDDE HSLDEIPETL PLLAVRDIVV
FNYMILPLFV GRDKSVKSVE ASLNDSRYIF IATQRDEKND DPGPEDLYEI GTVGLIMRML
KMPDGRLKVL VQGVSRARIK QFTQHDPHHQ VEVELIAEAE TPEITPDVEA LMRSAREQSE
EIISLRGIDA SEIMSVLNNV DEPGRLADLI ASNLRMKTEH AQSILECQDP IERLSLVNKQ
LLNEVEIASM QAKIQNMAKE GMDKAQKEFF LREQLKAIRS ELGEGADVDE EFEELREALD
KAGLSKDVKK EADKQLKRLE SMHPESSEAT VIRTYLEWLV ELPWKKTSKD RLDIKQAEKI
LNEDHYDLQK VKERILEYLS VRKLNPKMKG PILCFVGPPG VGKTSLGRSI ARSLNRKFER
MSLGGMRDEA EIRGHRRTYI GSMPGRIIQG IKNAGTRNPV FMLDEIDKVG NDFRGDPSSA
LLEVLDPEQN YSFTDHYLNV PFDLSKVMFI CTANMLDTIP SALLDRMEVI RLPGYTEQEK
VRIARRYLLP RQIKENGLKE EWVKISDNTI SQIIRDYTRE AGLRNLEREI GSVCRKMTRK
VAEGKEGPFR VTPQNLSKYL GVPPYQEDER ELELPPGVAV GLAWTPAGGE IMHVEVTPMP
GKGKLTLTGQ LGEVMKESAK AALSYARSRA EKLGLDHDFA DKKDLHIHVP AGATPKDGPS
AGVTLVTAVL SALTETPIRP DVAMTGEITL RGRVLPVGGI KEKILAAVAA GMRTVIIPAR
NEKDFKEIPS ELRRNIKIHT VESIDEIWPL VQQVSGPDTE SNGEK
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