| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1428 |
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| Symbol | |
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| ID | 8419257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1659653 |
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| End bp | 1660339 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038003 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_003198293 |
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| Protein GI | 258405551 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00255062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0926898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGGC AGGAAAGCAA ACCCCACTAT ATTGGTCATC GCCAGCGGCT CAAATCCCGC
TTCGACGCCT CGCCGGAATC CGTCCCGGAC TACGAAATTC TGGAACTTTT ACTCGGGTAC
GCCCTGCCCC AGCGCGACAC CAAACCTCTG GCCAAGGATC TGCTGGCCCG GTTCGGCACC
CTCGGCTCTG TGCTGACCGC CTCCGGCCAA GCGCTTCAAG ACGTGCCGGG CGTCGGCCCC
GGTGTGGGGC TTTTTTTCAC CCTCCTGCAG GAAACCCGGG CCCGGCAGGA ACAAAGCGGC
CTGCTCGGCC GGGACGTCCT CTCCTCCCCG GAGCGCGTCG CCCGCATGGC CCGGGAGCGA
TTCGGCCGTT TGAGCCACGA AGAGTTCTGG GTCGCCCTGG TGGACAACAA GAACCGACTT
TGTGATTTTT GTCGGCTATT CACCGGTACT GTGGATCAGA CCGCCGTCTA TCCCCGCGAA
GTCCTCCGGC TGGCCCTGAC CAAACAGGCC TCCGGGCTGA TCCTGGTCCA CAACCATCCC
GGCGGCGACC CGACACCATC CCCCCAGGAC AAGGATCTCA CCAACCGTCT CCTGTCCGCC
TCCCGGGAAC TCGGCTTCCG CATTCTGGAC CATGTCATCG TCTGTGAAGA AGCGTTTTTC
AGCTTCCAGT CCTCGCACAT GCTCTGA
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| Protein sequence | MPRQESKPHY IGHRQRLKSR FDASPESVPD YEILELLLGY ALPQRDTKPL AKDLLARFGT
LGSVLTASGQ ALQDVPGVGP GVGLFFTLLQ ETRARQEQSG LLGRDVLSSP ERVARMARER
FGRLSHEEFW VALVDNKNRL CDFCRLFTGT VDQTAVYPRE VLRLALTKQA SGLILVHNHP
GGDPTPSPQD KDLTNRLLSA SRELGFRILD HVIVCEEAFF SFQSSHML
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