Gene Dret_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1426 
Symbol 
ID8419255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1657468 
End bp1657977 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID645038001 
Productputative lipoprotein 
Protein accessionYP_003198291 
Protein GI258405549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0143558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.124121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCGC GGCCTGAATA CGCATTCACG CTCCTGCTGG CCGTGCTCAT GTTGCTCGCC 
GGCTGCGGCT ACCATTTGAG TTCTGCAGCG CCGGTCGCCT TGCCCCAGGG CATGACCCGG
TTGGCTCTGG ATAGCGTCAG CCAACCGAGC ACCGAGTCCT GGATGGAGCC GTATCTCCGT
CGCAGCCTGC GCGATGAATT GGCCCGCCGG GGCCAGATCA CCTGGGTCAG CCGGGACGCG
GCCCAGGGAC TGATCCGGCT CAAGGTCACC TCCTATTCCG ACTCGGGATT GCGGCAAAGC
AGCGACGAGG ACACCGTCAA ATCCGAAATT CGGATCGCCG GTGAGGCCCA GATCTTCGAG
TCTGCGTCCT CACAGCGGGT CTGGAACTCC GGCCAGGTCC AGACCAACGT TTCCTACCAA
ACTGACAATG AGAGCAGTAC CGCTGCCGGC AAAGACGCTG TGGACGACTT CATCGAACGG
CTCGTCGACC GGCTCGGCAG TGGCTTTTGA
 
Protein sequence
MWSRPEYAFT LLLAVLMLLA GCGYHLSSAA PVALPQGMTR LALDSVSQPS TESWMEPYLR 
RSLRDELARR GQITWVSRDA AQGLIRLKVT SYSDSGLRQS SDEDTVKSEI RIAGEAQIFE
SASSQRVWNS GQVQTNVSYQ TDNESSTAAG KDAVDDFIER LVDRLGSGF