| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1421 |
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| Symbol | |
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| ID | 8419250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1651859 |
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| End bp | 1652521 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037996 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_003198286 |
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| Protein GI | 258405544 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00972231 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.185271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCG GACTTATTCT CGGCGTCGGA ACTGTGAGCG CCCTGGACAA AAAAGGCGAT
GAAAGCCGTC TCCGCATCCG TCCCCACTTC TCACTGACCG ACTGCGAGTA CGGGGAAAGC
ATCGCCGTCA ACGGAGTCTG CCTGACCGTG GAGACCTTTG GACGGGATTG GTTTACGGTC
TACGCCTCTG CCGAAACATT GCGCCGCTCC AATCTCGGCG GCCTGCGCCC CGGAGATGCC
GTGAATCTTG AGCGCGCCCT GGCCGTGGGC GACAGGCTCG GCGGCCATCT GGTCAGCGGC
CATGTGGATT GTCTGGCCCG CATCGAACAG ATCACTGCGG CCGGCCAGTC CACCGCCTAC
ACCCTGGGCT TCCCCAAACA ATGGGGACCG TTCGTGGTCG ACAAGGGATC GGTCTGCCTC
GATGGGATCA GCTTGACCGT CAATGCCTGT ACACCAACGA CTCTGGCCGT AAATATCATC
CCGACCACGC GAAAGGAGAC GACCATCGCC TCGTGGCAGG TCGGCTCTCA GGTCAATATG
GAAGTCGACA TCATCGGAAA ATACGTCCAG AAAATGGTTG CTCCCTGGAG CGGAGAGCCG
GCAGGCGAGC CGGAAACCGG CCAGGGTCTG ACCCTGGATT TTCTCCGCGA GCACGGTTTT
TAA
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| Protein sequence | MFTGLILGVG TVSALDKKGD ESRLRIRPHF SLTDCEYGES IAVNGVCLTV ETFGRDWFTV
YASAETLRRS NLGGLRPGDA VNLERALAVG DRLGGHLVSG HVDCLARIEQ ITAAGQSTAY
TLGFPKQWGP FVVDKGSVCL DGISLTVNAC TPTTLAVNII PTTRKETTIA SWQVGSQVNM
EVDIIGKYVQ KMVAPWSGEP AGEPETGQGL TLDFLREHGF
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