| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1420 |
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| Symbol | |
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| ID | 8419249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1650686 |
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| End bp | 1651840 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645037995 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003198285 |
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| Protein GI | 258405543 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0788945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.298814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACG CGGTAGAACT GGGCGAAACC GGCTTCGGCC GAACCGCGCC AAATCCCTGC
GTCGGAGCGG TCATCACCCG CAATGGAGCG GTTATGGCCG AAGGATACCA CACCGCTTGC
GGGGCGCCCC ACGCCGAAGT CGAAGCCATT GCCCAGGCCA GGGCAGCTGG AGTGGACTTG
TCGGAATGCA CCTTGTGGGT CACATTAGAA CCGTGCAATC ATCACGGCAG GACCCCTCCG
TGCACCAAAG CCATCATCGA AGCCGGCATC CGCAGCGTGG GCATTGGCAC CCTGGACCCC
AATCCCCATG TGGGTGGCGG CGGAACCGCT TTTCTGCGTG ACCAGGGCGT GGAGGTGGAG
GTGGGTATTC TGGAACCGGC ATGCCGGGAC CTCATAGCCG ATTTTCTTCT TTGGCAACAG
GAAAAACGCC CTGGTGTCCT GCTCAAACTC GCGGCCACTC TGGATGGAAA AATCGCTACC
CGCAGCGGCC ATTCGGCCTG GGTCAGCGGC CCGGAAGCCC GCGAGGAGGT GCATGGACTG
CGCGGCCGGG TCGATGGTGT TCTCGTTGGA GGCGGGACCT TGCGCGCGGA CAATCCCCGC
CTGACTTGTC GCAGTGAAAG GGCCCTGAAT AAACAGCCCT TGGCCCTGGT CGTCACCTCC
CGCTTGCCTG AGGCCCAGGA CGATCTCCAC CTGCTGCGCC ATCGGCCGCA GGAGACCATC
TTCTGGACGA CTGACGACCA ATCCCGGACG CCCCAGGCCG ATGCCCTGCG CGCCCTGGGC
TGCCGGATCT GGGATCTGCC GCTCACCGCT TCCGGGATGC TCGATCTTCG GGCCGGACTG
ACACATTTTT TTGATCAAGG CCTGGGCCAC ACCATCCTCT GTGAAGGCGG CGGCCGATTG
GCTCTGGCTT TGGCCGAGCA AGGTCTTGCT GACAGACTAC GCCTGTACTT GGCCCCGAAA
ATCCTGGGCG ACGCGACAGC GATCAATCTT TTTTCCGGCC GGGACGAACT GGATATGGGG
CAGGCGTTGC CCTGGCGTTT CACCCGCTCG CGGCAGGTCG GCGCTGATAT GTGTCTGGAA
TTACGCCCTC AGACACAGCA GGGGGCCGCT CGAAACGGTG CCCCCGAATC GATCCCAGCC
CCCCGGTCGC GGTAG
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| Protein sequence | MQHAVELGET GFGRTAPNPC VGAVITRNGA VMAEGYHTAC GAPHAEVEAI AQARAAGVDL
SECTLWVTLE PCNHHGRTPP CTKAIIEAGI RSVGIGTLDP NPHVGGGGTA FLRDQGVEVE
VGILEPACRD LIADFLLWQQ EKRPGVLLKL AATLDGKIAT RSGHSAWVSG PEAREEVHGL
RGRVDGVLVG GGTLRADNPR LTCRSERALN KQPLALVVTS RLPEAQDDLH LLRHRPQETI
FWTTDDQSRT PQADALRALG CRIWDLPLTA SGMLDLRAGL THFFDQGLGH TILCEGGGRL
ALALAEQGLA DRLRLYLAPK ILGDATAINL FSGRDELDMG QALPWRFTRS RQVGADMCLE
LRPQTQQGAA RNGAPESIPA PRSR
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