| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1418 |
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| Symbol | glyA |
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| ID | 8419247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1648955 |
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| End bp | 1650217 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037993 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_003198283 |
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| Protein GI | 258405541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0614522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.461409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACT TGCTCCAGAC CGACCCAGAT ATGGCCAAGG CAATCGATCT CGAACACCAA
CGGCAATTGA GCAAGATCGA ACTCATCGCC TCGGAAAATT TCACATCCGC CGCCGTTCGC
GAGGCCACCG GCTCGATCAT GACCCACAAA TACGCCGAAG GGTATCCTGG CAAGCGGTAT
TACGGCGGCT GCGAATTCGT GGACATGGCC GAAGAACTCG CCCGGGAACG GGCCTGCCAG
CTCTTCGGGG CCGAGTACGC CAACGTCCAG CCCCATTCGG GCTCCCAGGC GAACATGGCG
GTCTATTTCG GGGCCTTGAA GCCAGGCGAC ACCATCATGG GCATGGATCT GTCCCACGGC
GGCCATCTGA CCCACGGCGC TCCGGTGAGC TTCTCCGGCA AGCTCTTCAA AACCGTGTTC
TACGGTGTGG ATCAAGCCAC TGGGATCATC GATTACGAGC AGGTCGCCGA ACAGGCCCGC
ACGCATCGCC CCCAACTGAT CATTGCCGGG GCCAGCGCCT ACCCCAGGGA AATCGACTTC
GCCCGATTCC GGGCTATTGC CGACGAGGTC GGCGCCCAAC TCATGGTCGA TATGGCCCAC
ATCGCCGGTC TTGTCGCCAC CGGGCTGCAC GCCTCTCCCA TCGGCCATGC CCATTTCACG
ACCTCGACGA CCCACAAGAC ACTGCGCGGC CCGCGCGGCG GACTCATCCT CAGCGGTTCT
GAATTTGGCA AGACACTGAA TTCCCAGATT TTTCCCGGTA TTCAGGGTGG ACCGCTCATG
CATGTCATCG CCGCCAAAGG GGTGGCGTTT GGCGAGGCCC TGCAACCGAG CTTTCGCGCC
TATCAGGAGC AGGTCGTGGC CAACGCTCAG GCACTGGGCC ACGCCCTGAC CGAGACCGGT
TTCGACCTCG TCTCCGGCGG GACCGATAAC CACCTCCTGC TTGTCGATCT GACGCGCAAG
AACATCACCG GGAAAGATGC TGAAGCTGCC CTGGACAAAG CCGGAATCAC CGCCAACAAG
AACACGGTCC CTTTTGAGAC CCGTTCTCCT TTCGTGACCT CCGGTATCCG CCTAGGCACA
CCGGCAGTAA CCACCCGCGG CATGACCGCC GAGCACATGC ATCAGATCGC GGCCTGGATC
GAAGCCGCGC TGGACAATAT GGACAACGAA ACTCGCTTGC TGGAGATCAA CAAGGAAATT
GCCGCCTTCG CCGGTGAATT CCCGCTATTC ATCTCCCAGC CTGGGGCGGA CCTCTCCTCA
TGA
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| Protein sequence | MQHLLQTDPD MAKAIDLEHQ RQLSKIELIA SENFTSAAVR EATGSIMTHK YAEGYPGKRY
YGGCEFVDMA EELARERACQ LFGAEYANVQ PHSGSQANMA VYFGALKPGD TIMGMDLSHG
GHLTHGAPVS FSGKLFKTVF YGVDQATGII DYEQVAEQAR THRPQLIIAG ASAYPREIDF
ARFRAIADEV GAQLMVDMAH IAGLVATGLH ASPIGHAHFT TSTTHKTLRG PRGGLILSGS
EFGKTLNSQI FPGIQGGPLM HVIAAKGVAF GEALQPSFRA YQEQVVANAQ ALGHALTETG
FDLVSGGTDN HLLLVDLTRK NITGKDAEAA LDKAGITANK NTVPFETRSP FVTSGIRLGT
PAVTTRGMTA EHMHQIAAWI EAALDNMDNE TRLLEINKEI AAFAGEFPLF ISQPGADLSS
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