| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1415 |
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| Symbol | |
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| ID | 8419244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1646202 |
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| End bp | 1646948 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037990 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_003198280 |
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| Protein GI | 258405538 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.949681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.622645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCTC CTCGCCCGGC AGCCCTGGTC ACCGGTGGGT CCCGGGGCAT CGGCAAAGCT
GTAGCCACCC GTTTGGCCAA GGACGGTTTC GAGGTCCTTT TGACCTACGT CAGCAAGCCT
GACGAGGCGC AAGCGGTCTG CGACGATATC GCCTCTCAGG GAGGCACAGC CCGCGCCTTG
TCCTTGAATA TAGGTGACAC CGAGGCTGTG GCCGCTTTCT TCAGGGACCA TATTGCTGGC
AAGGTCGACC TGCAGGTGCT GGTCAACAAC GCCGGCATTA CCAAGGATGG TCTGCTGGTG
CGCATGAAAC CGGCGGACTG GGAACAGGTC ATCCAGGTCA ATCTGACCGG CTCTTTTGCG
TGTCTGCAGC AGGCCGCGAA AATCATGATG AAGCGCCGCA GCGGGCGGAT TATCAATATC
GCTTCGGTTG TCGCTCAGAC GGGCAACCCC GGCCAAGCCA ACTATGTCGC GGCCAAGTCC
GGTCTGATCG GACTGACCAA GACCGCAGCT CTGGAACTGG CCCCCCGAGG CGTGACAGTC
AACGCCGTAG CCCCGGGATT CATTGCCACG GATATGACCG ACGCCCTGTC CGACTCGCTC
AAGGAGCAGT ACCAGCAAAA GATCCCGCTT CAGCAGTTCG GTCGCCCGGA AGATATCGCC
GGCACCGTCT CCTTTCTGGC CTCTGACGAG GCCGGATACA TCACGGGCCA GGTCCTTGGC
GTCAACGGCG GCATGCACCT CAACTAG
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| Protein sequence | MDAPRPAALV TGGSRGIGKA VATRLAKDGF EVLLTYVSKP DEAQAVCDDI ASQGGTARAL
SLNIGDTEAV AAFFRDHIAG KVDLQVLVNN AGITKDGLLV RMKPADWEQV IQVNLTGSFA
CLQQAAKIMM KRRSGRIINI ASVVAQTGNP GQANYVAAKS GLIGLTKTAA LELAPRGVTV
NAVAPGFIAT DMTDALSDSL KEQYQQKIPL QQFGRPEDIA GTVSFLASDE AGYITGQVLG
VNGGMHLN
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