| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1413 |
|---|
| Symbol | |
|---|
| ID | 8419242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1643789 |
|---|
| End bp | 1644877 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037988 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | YP_003198278 |
|---|
| Protein GI | 258405536 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.942909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC CTAGCCGGCC CTGCATAGCC GTCGACGCCA TGGGGGGCGA CTTCGGCCCC
CAGGTGGTCG TTCCCGGCGC TTTGAATGCC GCGAAAGCCA ATGCGCTGTC CTTGGTCTTT
GTGGGACGGG AGGAAGAGAT CCGTCCCCAC CTGGACCAAG CCGACACCAC TGGCGTGGAG
GTGGATGTTG TCGACGCACG GGAAGTGGTT GCCATGTCGG ACAAGCCCTC CCAATTGCGC
CGCAAGCAGG ACACGTCCAT CCAGAAAGCG TTTTTGCAGG TCAAAAAAGG GCGGGCCGAC
GGGGTTGTCA GCGCTGGCAA CTCAGGGGCC AGTCTTGCTT GCGGGATGTT TACCCTGGGC
CGGATCAAAG GCATTGAACG CCCAGCGCTG GCGTCCATCC TGCCGACAGA GAAAAACCCG
CTGGTACTGA TCGACGTTGG CGCCAACGTG GACTGCAAAG CGCGGCACCT CTTTCAATTC
GGGCTCATGG CCGATGTCCT GGCCAAGGAT GTCCTGCAGA TTGAAAGCCC CCGGGTGGGG
ATTTTGAGCA TTGGCGAGGA GGAAGGAAAA GGCAACGCCC TGGTGCGCGA TGCCTACACC
ATGCTCAGCC GGTCTTCCCT GAATTTTGTC GGCAATATTG AAGGCCGGGA CATTTTCGGT
GGAGACATCG ATGTGGCCGT GTGCGACGGC TTTGTGGGCA ATGTGGCCCT GAAAATCAGC
GAAGGGCTGG CCCACTCGTT GTCGCGCATT CTCAAACGGG AATTGACCAC GGGCGTCATG
GCCAAGTTGG GATGCCTCCT GGCCAGAGAC GGCTTCCGCC GATTCGCTAA ACGGGTCGAC
TATGCCGAAT ACGGCGGTGC CCCGCTACTT GGGCTCAACG GGATCGCCCT TGTTTGCCAC
GGGGCGTCGA ACGCCAAGTC CATTTCCAGC GCCGTAGCCA TGGCTGGCAC GTTTGTCGAC
AACAATGCCA ATGAACACCT AGTCCAGGGA TTGACCAGAA ACAAGGAACT TTCCCTCTAT
GGGCGAGGCA ATGGTGAGGC TTCTGAAGCC GCTGCGTCCC AGGAGTTGCC CAAGGCCTCC
TCTTCGTAG
|
|---|
| Protein sequence | MNKPSRPCIA VDAMGGDFGP QVVVPGALNA AKANALSLVF VGREEEIRPH LDQADTTGVE
VDVVDAREVV AMSDKPSQLR RKQDTSIQKA FLQVKKGRAD GVVSAGNSGA SLACGMFTLG
RIKGIERPAL ASILPTEKNP LVLIDVGANV DCKARHLFQF GLMADVLAKD VLQIESPRVG
ILSIGEEEGK GNALVRDAYT MLSRSSLNFV GNIEGRDIFG GDIDVAVCDG FVGNVALKIS
EGLAHSLSRI LKRELTTGVM AKLGCLLARD GFRRFAKRVD YAEYGGAPLL GLNGIALVCH
GASNAKSISS AVAMAGTFVD NNANEHLVQG LTRNKELSLY GRGNGEASEA AASQELPKAS
SS
|
|---|
| |