Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1397 |
Symbol | |
ID | 8419226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1631429 |
End bp | 1632430 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645037972 |
Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
Protein accession | YP_003198262 |
Protein GI | 258405520 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTC GTGTCGCACT CAACGGATTC GGGCGTATTG GCCGATATAT GGCCCGGTTG TTGTCCGCAA ACACTGACCT GGAACTGGTG GCGGTCAACG CCCGAGCGGA TAATGCTACC CTGGCCCATC TTCTCAAATA CGATTCCGTC CACCGGACCT TTGCGGGGAC AGTCGAGGCC AATGAGCAAG GGTTTCTTTT GGAAGGCCAG CAGGTCACAG TGGCCCGAAA CAAACCGGGG GAATGGACCT GGGGCGAACT CGGGGTGGAT ATTGTTCTGG AGACCACAGG CAAATTCACG GACCGTGAGA GCTGCGAAAA GCATCTGGCC TGCGGCGCGA AACGGGTTGT GGTCAGCGCC CCGGCCAAAC AACCGGACGT GATGGTTGTT ATGGGGGTTA ACGACAGCGA TCTGGGCCCT GAGCACAAGA TCGTCTCCAA CGCGTCCTGC ACGACCAATT GTCTGGCTCC GGCGGCCAAA GTCCTGCACG ATAATTTTGG TCTTGAACGC GGCCTGATGA CCACGGTGCA CTCGTATACC ATGAGCCAGC GCATTTTGGA CGGGTCGCAC AAGGACTTGC GCCGGGCCCG TGCCGCGGCT ATGTCCATGC TTCCGACGAC CACCGGGGCG GCCAGAGCGG TGACGAAAGT TATCCCCTCG CTGGAGGGCA AGCTCGACGG CATGGCCATC CGGGTCCCGA CCCCGAACGT TTCGCTGGTC GATTTGAGCG CCGATCTGGG CAGGGCCACC TCCGCTGAAG AAATCAACGC GGCGATGAAA GCCGCCTCTG AAGGGCCAAT GCAAGGGATT CTCGGCTATA GTGAGGAACC GCTTGTTTCG GTGGACTATA CCGGATCGAC TTACGGCGGT GTCCTTGACG CGTTGACGAC AAGTGTCATG GACGGCACCC TGGCCAAGAT CATCGTCTGG TACGACAATG AATCGGGGTT TTCCAATCAG CTGCTGCGTC TGACACAGCG GGTCGCCTCG TTGCTTGGCT GA
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Protein sequence | MAVRVALNGF GRIGRYMARL LSANTDLELV AVNARADNAT LAHLLKYDSV HRTFAGTVEA NEQGFLLEGQ QVTVARNKPG EWTWGELGVD IVLETTGKFT DRESCEKHLA CGAKRVVVSA PAKQPDVMVV MGVNDSDLGP EHKIVSNASC TTNCLAPAAK VLHDNFGLER GLMTTVHSYT MSQRILDGSH KDLRRARAAA MSMLPTTTGA ARAVTKVIPS LEGKLDGMAI RVPTPNVSLV DLSADLGRAT SAEEINAAMK AASEGPMQGI LGYSEEPLVS VDYTGSTYGG VLDALTTSVM DGTLAKIIVW YDNESGFSNQ LLRLTQRVAS LLG
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