Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1389 |
Symbol | |
ID | 8419218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1622669 |
End bp | 1623472 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645037964 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003198254 |
Protein GI | 258405512 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000307916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.598576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC CCCATTTCGC GCCTGTACCG CTTCAACTGC AGCGACTGCA GCAGTGGCTT GGCGATCTGG CTGGCGCACA CCGCCAGCCC GCCCCTGAGG ATCAGGAAAA GATCGACCTC AAATACGCCC ACAGCCTGCG GGTTTTTCAG GAAGCCTCAG CCCTGTGCAA GGCGTTGGGG CTTCCTGAAA AACAGCGCCT GCCGGTCCGG GCCGCTGCCC TGGTGCACGA CTGTGGCCGT TTTCCTCAAT ACAGCCGCTA CAAGACCTTC CGCGATCCAG ACTCCGTCAA CCATGCCCGA TTAGGCCTGC GGACACTGCG CGAAGAACAG CCCTTGGACA CAGCGGAGTT TTCCCCTGCG GTCAGCAGGG ATATCGAACT GGCCGTCTTG CTGCACAACC GCAAGCACCT CCCTGCCTGG TTGACTCCCT GGCACCACCG CCTGTGCGCC ATCGTCCGCG ATGCGGACAA GCTGGATATC TTCGCCGTTA TCCTTGGCCA TTTGGAACGC GACGTCTTAG AGCAGGATCC CGCCATCACC CTCGGCCTCA GACCCGATCC GACCCGCTAT TCCTCTGAGT TGGTCGCCCA GGTCCAGGCA GGAGCGCAAG TCGACTACCG GCATTTGGTC TGGGTCAATG ATTTCAAACT GCTCCTGGCC AGTTGGGTGC CTCATCTGGT CTTTGCCGCC AGCCGGCACC GGCTCCGCGA AAGCGGTCTT CTCGATCGAC TTCTTGCCAG CCTTCCTGCG GATCCTGCCT GCAGATCATT GGCGGCAACC CTCCATGGAT ACAGCACTAT CTGA
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Protein sequence | MTEPHFAPVP LQLQRLQQWL GDLAGAHRQP APEDQEKIDL KYAHSLRVFQ EASALCKALG LPEKQRLPVR AAALVHDCGR FPQYSRYKTF RDPDSVNHAR LGLRTLREEQ PLDTAEFSPA VSRDIELAVL LHNRKHLPAW LTPWHHRLCA IVRDADKLDI FAVILGHLER DVLEQDPAIT LGLRPDPTRY SSELVAQVQA GAQVDYRHLV WVNDFKLLLA SWVPHLVFAA SRHRLRESGL LDRLLASLPA DPACRSLAAT LHGYSTI
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