Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1381 |
Symbol | |
ID | 8419210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1613833 |
End bp | 1614522 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037956 |
Product | protein of unknown function DUF45 |
Protein accession | YP_003198246 |
Protein GI | 258405504 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.263783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.318048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATTC GAGACCTCCC CCCGCATACC GTGCGTGAGC ATCCACGAGC CAAACGTGTC ATTTTGCGCG TGAAGTGTGG CGTTGTCCAA GTCACTGTTC CCAGAGGATT TCCTCGGCAG CGGGTCGGCG CGATCCTTGA GGCACACCAT GCATGGCTGC AGCGTCACCT TGATGAGACC AACACACCCC AGGTCGAGGT GCCAGAACGG GTTGCCCTTC CGGCCCTTGG TCGGGAATTC CCGGTGGTCT GCTGTCCGGC CAAGCGACCG TATGTACAGG CGGTGGGAGA CCATCTCCGC CTTGGGGTTT CAGATGCTCC CAGGCAAGAG TGTCTGCTTT TGTGCCGCTG GCTGCAGAAT CTTGCCCAGT CCGTGCTCCC GGGCTGGTGC GCCCAGACCG CTCGCCGTTC CGGGTTATCG GATTACGCCA GAGTTCAGGT CCGGCGGCAA AAAACGCGGT GGGGCAGTTT TTCAATGAAA AAGACTATCA GCCTGAATTG CAAGCTGCTT TTTTTCCCGC CTGAGGTTGT GGAGTATGTG ATGGTGCATG AACTTGCGCA TTCGCGCCAC AAGGGACATG GGTCGGCATT CCAGGCCTTG GTGCGCTCTT TAGTCCCCCA CTGTTCTTCC AGCGAAGCAA TCCTTCGCGT GCCAGGGCAG TGGGTTCCAC AATGGGTGGA AGTGGAATAG
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Protein sequence | MKIRDLPPHT VREHPRAKRV ILRVKCGVVQ VTVPRGFPRQ RVGAILEAHH AWLQRHLDET NTPQVEVPER VALPALGREF PVVCCPAKRP YVQAVGDHLR LGVSDAPRQE CLLLCRWLQN LAQSVLPGWC AQTARRSGLS DYARVQVRRQ KTRWGSFSMK KTISLNCKLL FFPPEVVEYV MVHELAHSRH KGHGSAFQAL VRSLVPHCSS SEAILRVPGQ WVPQWVEVE
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