Gene Dret_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1367 
Symbol 
ID8419196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1595319 
End bp1595630 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content44% 
IMG OID645037943 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_003198233 
Protein GI258405491 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00775244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.571191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGG AGAACGATCC TCGTATCGTA CCGGAAAAAG GTGAAGAAAC AGCCGTTAAA 
GAGCCTTCTC GATATAAGGT CCTTCTGCAC AACGACGATT ATACAACAAT GGAATTCGTA
GTCCAGGTGC TTATGGACAT TTTCAATAAA TCTGAAGCGG AAGCGACTCA GATAATGCTC
AATGTACACA AAAACGGTGT TGGTGTTTGT GGAATTTATA CAGCCGAAGT TGCAGAGACT
AAAGTAGCCA TGGTCAGCCA GATGGCACGT AAGCACGGCT ATCCTCTGAA GTGTACAATG
GAAGAGGTGT AA
 
Protein sequence
MSMENDPRIV PEKGEETAVK EPSRYKVLLH NDDYTTMEFV VQVLMDIFNK SEAEATQIML 
NVHKNGVGVC GIYTAEVAET KVAMVSQMAR KHGYPLKCTM EEV