| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1358 |
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| Symbol | |
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| ID | 8419187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1585797 |
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| End bp | 1586765 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037934 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003198224 |
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| Protein GI | 258405482 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.303636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.363164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAT TACTCGAAGT CAACGATCTT GTCGTCAACT TCGCGTTGCG CTTTGGCGAT
CTGACGGCCC TGAACGGCAT CAGTTTCGAT GTCGATTCCG GAGAGCGGTT GGGGCTCGTT
GGTGAAAGCG GCGCCGGGAA ATCTGTGGCG GGGTTTTCGA TTATTAACCT GATCAGCAAA
CCTGGGTACA TCGCCTCAGG GGCAGTGCTC TTCGAAGGCC GGGATATCAG TGCATTGTCT
ACGGAGCAGA TGCGCCATAT TCGCGGCAAT CGCATCAGCA TGATTTTTCA GGACCCGATG
ATGACCCTCA ATCCGGTGCT GACGATCGGA ACCCAGATGG TGGAGACCCT CAAAGCACAC
CGGCCAAAGA TTTCCAGGCA GGAAGCGGAA CGGATTGCCC TGGAAAAGTT GAGTCAGGTC
TATATCCCGT CTCCGGAAAA ACGGTTGCAG CAATACCCCC ATGAGTTTTC AGGAGGGATG
CGGCAGCGCA TTGTCATTGC CATTTCTCTG CTGACAGACC CGGCTTTGAT CATTGCCGAC
GAACCGACGA CAGCTCTGGA TGTGACCATT CAGGCCGAAA TCATGGACCT GTTGATGGAG
TTGTGTACGA CGCAGAAGAT GGGGTTGATC CTGATCACCC ACGATCTCGG GGTCGTTTCG
CAGACGACGC AGAAAATTGC GGTTATGTAT GCCGGGAAGA TCGTGGAGTC CGGTCCGACA
CATGATGTGG TCGCGGCTCC TAAGCACCCC TATACCCAGG GACTGATCAG CGCCTTGCCC
CAGGGGCTGC ACGGTGGGAA ACGGTTGAAC CAGATACCAG GCTCCATGCC GAATTTGACC
TCTATTCCGC CGGGATGTTC CTTTCACCCC CGCTGCACAC ACGCTATGGA TATATGCATC
CAGCACACGC CGGAACTGCA AACAGATGAA ACCGGTAGCC GCCAAGTGGC ATGCCATTTG
TACGGATAG
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| Protein sequence | MTKLLEVNDL VVNFALRFGD LTALNGISFD VDSGERLGLV GESGAGKSVA GFSIINLISK
PGYIASGAVL FEGRDISALS TEQMRHIRGN RISMIFQDPM MTLNPVLTIG TQMVETLKAH
RPKISRQEAE RIALEKLSQV YIPSPEKRLQ QYPHEFSGGM RQRIVIAISL LTDPALIIAD
EPTTALDVTI QAEIMDLLME LCTTQKMGLI LITHDLGVVS QTTQKIAVMY AGKIVESGPT
HDVVAAPKHP YTQGLISALP QGLHGGKRLN QIPGSMPNLT SIPPGCSFHP RCTHAMDICI
QHTPELQTDE TGSRQVACHL YG
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