Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1350 |
Symbol | |
ID | 8419179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1577101 |
End bp | 1577754 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037926 |
Product | transaldolase |
Protein accession | YP_003198216 |
Protein GI | 258405474 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0395427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCT TTCTCGATAC TGCCAACCGG GGAGATATTG CCCAGGCCCA CCAATGGGGA TTGATCGACG GCGTGACCAC CAATCCTTCC CTGCTGGCGA AAGAGGGCGG CGACTGGCGC GCTGTGGCCC GCGAGATCTG TGATCTGGTT GAAGGCCCAG TGAGCCTGGA GGTCATTGCT ACGGAGACCG AAGCCATGAT CGCTGAGGCC AGGGACTTGG TCAAAATCGC CCCCAACGTC GTGGTCAAGA TCCCCATGAC CCTGCCCGGG TTGCAGGCGG TGCGCGACCT TGCCGCCCAG GAGATCCCGA CCAATGTGAC ACTGGTTTTT TCACCAGCCC AAGCCCTGCT CGCGGCCAAG GCCGGCGCCT CCTATATCAG TCCGTTCGTC GGCCGCCTCG ATGATATCGG ACACAACGGC ATGGATATCG TTGCACAGAT ACTCGAGATA TTTCAAAATT ACAATTTCCA GGCCGAGGTA CTGGTTGCAA GTGTCCGTCA CAGCAACCAT GTCCTGGAAG CGGCGCAGCT CGGGGCGGAT ATCGTCACAC TGCCTATGGC GGTGCTCAAA AAATTGGCTG GCCATCCTCT GACCGATCAG GGCCTGGAAA AATTTCTGGC GGACTGGAAG ACGCTGGATT CTAGCACCTC CTAG
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Protein sequence | MRFFLDTANR GDIAQAHQWG LIDGVTTNPS LLAKEGGDWR AVAREICDLV EGPVSLEVIA TETEAMIAEA RDLVKIAPNV VVKIPMTLPG LQAVRDLAAQ EIPTNVTLVF SPAQALLAAK AGASYISPFV GRLDDIGHNG MDIVAQILEI FQNYNFQAEV LVASVRHSNH VLEAAQLGAD IVTLPMAVLK KLAGHPLTDQ GLEKFLADWK TLDSSTS
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