Gene Dret_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1341 
Symbol 
ID8419170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1568663 
End bp1569088 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID645037917 
Producthypothetical protein 
Protein accessionYP_003198207 
Protein GI258405465 
COG category[S] Function unknown 
COG ID[COG5416] Uncharacterized integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.174346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.546872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACC TCAAACTGTT TGCGTTCATT ATTTTCTTTG TTTTGGCCAT GATATTTTTT 
GTCCAAAACA CGGGCCCCCT CTCCTCGACC CTGGAGCTTA AATTCGAATT GCTCCAATGG
AGTTGGCTGT CCAAGCCTCT GCCGTTTTAT GTGGTGGTTC TGATTGCCTT TGCCGTCGGT
GCCATTTTGT CCCTGCTGTA TTTTCTGGTC GAGAAAATGC GCTTGAGCGG TGAGGTCAAA
AAATATAAGA ATAAGGTGCG CAGCCTGGAA AAAGAGCTGA ACTCCTTGCG CAATATGCCT
TTGGAAGAAA GTAATTACAG CACGGAAAGC GCCTCCTCCG CTGTTTCGGA GCCGACTCCG
GCCACGGACA GCGCTGAGAA GAGCGCTGGC TCCGAAGAGA GCCAAGAAGA GACATCGTTC
AAGTAA
 
Protein sequence
MRYLKLFAFI IFFVLAMIFF VQNTGPLSST LELKFELLQW SWLSKPLPFY VVVLIAFAVG 
AILSLLYFLV EKMRLSGEVK KYKNKVRSLE KELNSLRNMP LEESNYSTES ASSAVSEPTP
ATDSAEKSAG SEESQEETSF K