| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1339 |
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| Symbol | |
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| ID | 8419168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1564679 |
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| End bp | 1567369 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037915 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_003198205 |
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| Protein GI | 258405463 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.742998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAAGA CCAAGCTGAC CCCTATGCTC GAACAGTATT TGCGCATCAA GGAAGACTAT
CCTGATGCGC TCTTGTTTTT TCGAATGGGG GATTTTTACG AACTCTTTTT TGAAGACGCC
GAGACTGCGG CCCGGGTCCT GCAGATCACC CTGACCTCCA GAAATCCGAA TGCGGAAACC
AAGGTCCCTA TGGCCGGCGT GCCCCACCAC GCCACGGAGG AATATCTCCG GCAGCTTCTG
GAGCAAGGGT ACAAGGTGGC CATCTGTGAC CAGGTGGAGG ACCCCCGCCA GGCCAAAGGG
CTGGTTAAGC GCGAGGTGAC CCGTGTTTTG ACCCCTGGTA CAGTGGTTGA GGATTCGACC
CTGTCGGCCA AGACCAGTAA TTATCTGGCG GCCGTGTGCT GGCATGGAGG CAGCAAGACC
GGCGCTGCGG CGTGGATCGA TTTTTCCACC GGACAATGGA CGGGGGTGCA GTCCAAGCAC
CAGGTCCAAT TGTGGCAATG GCTGATCAAG ATCCAGCCGC AGGAGGTCCT GATGCCGGAG
GGCACGGAAC TCCCGGAGCA GGCCCAGGTG CTGCGCGACA AGATCCAATT CTGTCCGTAT
AACGGGTATT TTGAGCCGGG CCGGGCCCGT GAACGTCTCC TGCAGGCTCA AGATGTGGCC
AGCCTGACTC CCTTGGATCT GGAGGATAAA CCCGCCCTGG TCCAGGCGTG CGGTGCGCTG
CTGGCCTATT TGCACACAAC GCAGCGCTGC GAAGACCTTT CCCATCTCGG CCAGTTCCAA
CCAATCCAGC CCAACCGATT TCTCCAACTT GACGAGGTCA CTGAGCGCAA TCTCGAACTC
TTTCAGCGTC TTGACGGCGG CAAGGGACCA GGGACGCTGT GGCACGCCCT GGACCGGACC
CTGACCCCGA TGGGCGGGCG ACTTCTTCAG CAGCGGCTGC GCCAGCCGTG GCGTGACCTG
CGAACCATCA CCGCTCACCA GGGTGTTGTC GCCCTGTTGG TGGACGACGA CGGATTGCGC
CAGAGTCTGC GCGAGCGTCT TGACGCCGTT TATGATCTGG AACGGTTGAC GACCCGTATT
TTTCTCGGCC GGTGTACTCC CAAGGATTTC ATTGCCCTGC GCAATAGCCT GAAAGCGTTG
CCCGCCCTGC AGTCCCTGCT TGAAGAAGAC CGCCAGTGGC CTGAGCTGCT TGGTCAGGAA
AAGCGGGCCT GGGACAACCT CGATGATGTC CGGGAACTGC TGGAGAGGAG TCTCGTGGAC
GCTCCCCCTC TGGTGATCAC CGAGGGCGGA CTGTTTCGGC ACGGTTTTGA TCCGGAACTC
GACGAATTGC TCGATTTGAG TGAGGATGGG GAAGGACGAC TGCAGGAATT GTTGCACAAA
GAGCAGCAGG CTTCCTCATT GCCCAAGCTG AAGTTGGGCT ACAATCGCGT TTTCGGGTAT
TATTTCGAAT TGAGCAAAGC CCATAAGGGG CCGGTACCCG ACCACTTCAT CCGGCGACAG
ACCCTGGTCA ACGCCGAGCG GTACATCACC GAAGAACTCA AAACGATCGA GGATAAGGTT
TTCAGTGCCG CAGAGAAGCG CAAGGGCCTG GAATATAATC TTTTCCAGAA CTTGCGTGAG
CAGGTTGCCG CGCACCGGGA ACGGGTTATG GCTGTAGCCG GTATCCTGGC CCGCCTCGAT
TATTGGCAGG GATTGGCCCA CGCCGCCCGG CAATGGGAGT GGAGCCAGCC TGAGCTGCAT
TCAGGGCTTG ATCTGCGCAT CATCGGCGGT CGCCATCCCG CAGTTGAAGC CACGCAGGGG
CGAACCGATT ATATTCCCAA CGACGTTCGC ATCGAGGGAG ATGACCGCGT TTTGCTCATC
ACTGGACCGA ATATGGCCGG GAAATCGACG GTCCTGCGCC AAACGGCCAT TATCTGCATC
CTGGCCCAGA TCGGCTCCTT CGTTCCGGCT CGGGAGGGCT GGATCGGGCT GTGCGACCGC
ATTTTTACCC GTGTCGGGGC CTCGGACAAT CTCGCTCAAG GACAATCGAC CTTCATGGTC
GAGATGACGG AAACGGCCCG CATTTTGCGC CAAGCCAGCC GAAACAGTCT GGTCATCCTT
GATGAGATCG GACGCGGCAC AAGCACCTTC GACGGATTGG CTTTGGCCTG GGCGGTCGTT
GAGGATCTCG TCCAGCGTGG TCATGGCGGC GTGCGCACCC TCTTTGCCAC CCACTACCAT
GAGTTGACCG ACCTGGAGGG ACAGCTTCCC GGGGTGCGCA ATTACAATAT CGCGGTCAAG
GAATGGCGAG GGGATATCGT TTTTCTCCGC CGGCTTGTGC CTGGCCCGGC GGATCGCAGT
TACGGCATCG AGGTCTCGCA ATTGGCCGGT GTACCCCAGG GCGTCGTCAA GCGAGCCAAG
GCTATCCTTG CGCAACTCGA GGAAAAAAGC CGGGGACTGC GCCATACCCC CGAGAAAGGC
AGCCACCGGC AGCAATCCCT GCTCCCAGGC CTTTTCGACC CCCCAGAAAA GCCCCAGCCG
GAGCCGACCG CGCCGCAGGA CCAGGGGCCG CATCCCCTGG AAGAAGCTTT GCAGGAATTG
GATCTCAACG GGATGACCCC GCTTGATGCC CTGAACCTCT TATCTCGATG GAAGCACGAA
TGGACACCTC CGCACGATTC TCAGGATACG CCTGGTACCT CCTCGTCATA A
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| Protein sequence | MSKTKLTPML EQYLRIKEDY PDALLFFRMG DFYELFFEDA ETAARVLQIT LTSRNPNAET
KVPMAGVPHH ATEEYLRQLL EQGYKVAICD QVEDPRQAKG LVKREVTRVL TPGTVVEDST
LSAKTSNYLA AVCWHGGSKT GAAAWIDFST GQWTGVQSKH QVQLWQWLIK IQPQEVLMPE
GTELPEQAQV LRDKIQFCPY NGYFEPGRAR ERLLQAQDVA SLTPLDLEDK PALVQACGAL
LAYLHTTQRC EDLSHLGQFQ PIQPNRFLQL DEVTERNLEL FQRLDGGKGP GTLWHALDRT
LTPMGGRLLQ QRLRQPWRDL RTITAHQGVV ALLVDDDGLR QSLRERLDAV YDLERLTTRI
FLGRCTPKDF IALRNSLKAL PALQSLLEED RQWPELLGQE KRAWDNLDDV RELLERSLVD
APPLVITEGG LFRHGFDPEL DELLDLSEDG EGRLQELLHK EQQASSLPKL KLGYNRVFGY
YFELSKAHKG PVPDHFIRRQ TLVNAERYIT EELKTIEDKV FSAAEKRKGL EYNLFQNLRE
QVAAHRERVM AVAGILARLD YWQGLAHAAR QWEWSQPELH SGLDLRIIGG RHPAVEATQG
RTDYIPNDVR IEGDDRVLLI TGPNMAGKST VLRQTAIICI LAQIGSFVPA REGWIGLCDR
IFTRVGASDN LAQGQSTFMV EMTETARILR QASRNSLVIL DEIGRGTSTF DGLALAWAVV
EDLVQRGHGG VRTLFATHYH ELTDLEGQLP GVRNYNIAVK EWRGDIVFLR RLVPGPADRS
YGIEVSQLAG VPQGVVKRAK AILAQLEEKS RGLRHTPEKG SHRQQSLLPG LFDPPEKPQP
EPTAPQDQGP HPLEEALQEL DLNGMTPLDA LNLLSRWKHE WTPPHDSQDT PGTSSS
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