| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1337 |
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| Symbol | |
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| ID | 8419166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1562941 |
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| End bp | 1564197 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037913 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003198203 |
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| Protein GI | 258405461 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATT TTGTATACAA AGACGGCCGC TTGCAGGCTG AAGAGTTCGA TGTGGCCGAG
TTGGCCGCCA CCTACGGCAC CCCCTTGTAT ATCTACTCTA CGGCCACTTT GCGCCGCCAT
TACCACGCCT TTGATTCCGC CTTCGAGGGG TTGGACCATT TGACCTGCTT CTCAGCCAAG
GCCAATTCCA ACCTCAGTGT CCTGCGCCTG CTGGGCGACA TGGGCGCCGG GGTGGATATC
GTCTCTGGCG GAGAATTGTA CCGGGCATTG AAGGCCGGGA TCGCCCCGGA GAAAATCGTC
TATTCCGGGG TCGGCAAACA GCGCCATGAA ATCGAACAGG CCCTGGAAGC CGATATTTTG
ATGTTCAATT GCGAATCTGT CCCGGAATTG GAACTCATCA ACGAGGTGGC CCAGGAGAAG
GGGCTGGTGG CCCGGATCAG TCTGCGCATC AACCCGGATG TGGACCCCCA AACCCATCCC
TACATTTCCA CCGGTCTTAA GAAGAACAAA TTCGGCCTCA ACCTCGAGCA ATCCGAAGAG
GCTTATCGCT TGGCCCGGGA TCTGCCTGGC GTGGACCCCA TCGGTATGGA TTGTCATATC
GGCTCGCAGC TGACGAGCAT CGAGCCGTTT CTGGAGGCCC TGGAGCGGCT GAAGCGTTTT
TATGCCAAGC TGCAGGACAT GGGGCTGGCC ATTCGCTACC TGGATCTGGG CGGCGGCCTG
GGCATCACCT ACGACGAAGA GACGCCACCA CACCCTCAGC AACTTGGCGA GGCCTTGGCC
GAATCTCTGA AGGACCTGGA TGTGACCCTT ATTCTCGAGC CTGGTCGGGT CATTGCTGGC
AATGCCGGCA TCATGGTCAG CAAGGTCTTG TACACCAAGA CTTCGGAGGC CAAACATTTT
ACCGTTGTTG ACGCGGCCAT GAACGATCTG GTCCGCCCTT CTCTCTACGG TGCCTACCAC
CGTCTGGCCG AAGTCACTCC CCAGAAGCGT CAGGAATTGC CGATGGACAT TGTTGGTCCT
ATTTGTGAAA CAGGGGATTT TCTGGCTCAG GACCGGACAC TTCCGGAGCT GGCCCCCGGT
GAGTGTATCG CCGCATTTTC CGCGGGCGCG TATGGCTTCA CCATGGCCTC ACAATACAAT
TCGCGCCCCC GGGCGGCCGA GATCCTGGTC GATGGCGATC AGGCCCGGAT CGTTCGCCGC
CGCGAAACCT ATGAAGACTT GATCGCTTTG GAAACGGACG CCTTGACGGG AAAATGA
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| Protein sequence | MHHFVYKDGR LQAEEFDVAE LAATYGTPLY IYSTATLRRH YHAFDSAFEG LDHLTCFSAK
ANSNLSVLRL LGDMGAGVDI VSGGELYRAL KAGIAPEKIV YSGVGKQRHE IEQALEADIL
MFNCESVPEL ELINEVAQEK GLVARISLRI NPDVDPQTHP YISTGLKKNK FGLNLEQSEE
AYRLARDLPG VDPIGMDCHI GSQLTSIEPF LEALERLKRF YAKLQDMGLA IRYLDLGGGL
GITYDEETPP HPQQLGEALA ESLKDLDVTL ILEPGRVIAG NAGIMVSKVL YTKTSEAKHF
TVVDAAMNDL VRPSLYGAYH RLAEVTPQKR QELPMDIVGP ICETGDFLAQ DRTLPELAPG
ECIAAFSAGA YGFTMASQYN SRPRAAEILV DGDQARIVRR RETYEDLIAL ETDALTGK
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