Gene Dret_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1326 
Symbol 
ID8419155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1552015 
End bp1552806 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID645037902 
Productglutamine cyclotransferase 
Protein accessionYP_003198192 
Protein GI258405450 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.211339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.38005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCG TGCTGCTTGG TGTTGTGGTG CTGGCGATTG GCCCCACGAG CTCTCCCCGG 
CAGGCGTATG CCGAGGCGCC TGTGCTTACC CCGCCTGCTG CTCTCCAGAC CTTCCCCCAC
AAGCGGACCT CGTTTACGCA AGGCCTCGTG TTTCAGGATA GTGTCTTTTG GGAGAGCACA
GGCCTGTACG GACGCTCCTC CATTTCGAAG CGGCGGGTGG CCACCGGGGA AATCCTGGCT
GAGCTCCCTT TACCCCCGGA CTGTTTCGGG GAAGGGTTGG CACTGATGCA CGGCCGGCTC
TTCCAGTTGA CCTGGAAAAG CAGGACCGGG TTTGTTTACA GCCCGGCCCC CCTGCGCCGG
ATCGGGCGCG TTGCCTACAG CACCGAAGGC TGGGGATTGG CCGCACTGGG CACGCAGCTG
GTCATGAGTG ACGGCAGCGC AGCCTTGACC ATACGCGACC GTCGCTTTCA GCTGACAAAG
CGGATTGAGG TACGTGACGG AACCCGGGAG GTCAAGTCGC TCAATGAACT GGAAGTCATC
CAGGGGCGTA TATGGGCCAA TGTCTGGCCC AGCGACCGCA TCGCGATCAT TCGGCCATCC
AGCGGTCGGG TGGAGGCCTG GCTCGACTGC TCGGGGCTGC GCCGCCGCTT TCCGCAACTC
CAAAAAGCCG ACGTGCTCAA TGGCATTGCT TTTGACCCGG AGCATAAGCG AGTCTTTGTG
ACCGGCAAGT TCTGGCCTCT GGTCGTCGCC TTTTCCCTCG ATGCCTTGGA GCTGCCCTCC
AGGGCGCCTT GA
 
Protein sequence
MLLVLLGVVV LAIGPTSSPR QAYAEAPVLT PPAALQTFPH KRTSFTQGLV FQDSVFWEST 
GLYGRSSISK RRVATGEILA ELPLPPDCFG EGLALMHGRL FQLTWKSRTG FVYSPAPLRR
IGRVAYSTEG WGLAALGTQL VMSDGSAALT IRDRRFQLTK RIEVRDGTRE VKSLNELEVI
QGRIWANVWP SDRIAIIRPS SGRVEAWLDC SGLRRRFPQL QKADVLNGIA FDPEHKRVFV
TGKFWPLVVA FSLDALELPS RAP