| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1317 |
|---|
| Symbol | |
|---|
| ID | 8419146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1543123 |
|---|
| End bp | 1544079 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645037893 |
|---|
| Product | Acyl transferase |
|---|
| Protein accession | YP_003198183 |
|---|
| Protein GI | 258405441 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.038855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGT TGCCCCACGC GGCTTCTGTT GCCGCCATCT TTCCGGGCCA GGGATCGCAA
GAGCCCGGGA TGGGTCGAGA TATCGCCGAG CATTGGCCCG AGGCCATGGA ATTGTGGAAA
AAGGCCGAAG CCGTGGCCCA GGCCCCGCTT CGTGAAATAT ATTGGGAAGG AGACGGCGAG
GCAATGGCGG AGACCCGCTA TCTCCAGCCA GCCTTGACGG TGACCAATCT TACTGTCTGG
GGACAGGTTC GATCCCGTAC TCCGGTGGCC TGTGTTGCCG GCCACAGTCT GGGCGAGTTC
GCCGCCCTGG CCGCAGCTGA GGTCTTGAGC GCCGAGGCGG TTCTGGAACT GGTCACCCTC
CGAGGGCGGC TGATGGCTGA GGCCGGTCAG GGCCAGGATG GAGCTATGGC TGCTGTGCTC
AAGTTGCAGA AGTCCCAGGT CGAGGAATTG GTCAATACGG TGACCGAGGA GACCGGTCAG
GAACTGCGGA TTGCCAATTA TAACGCCCCT ACGCAACTGG TTGTCAGTGG CCGTCGCTCT
GCTGTGGAGC GCCTTGGGCA ATTGGCCAAG GAGCACAAGG GACGCGCGGT CCCGCTGCCG
GTCAGTGGCG CTTTCCATTC CCCCCTGATG CAGGGGGCGG CCCAGGAACT GGCCGGATAT
ATGCAACGGT TGCATTGGCG GGAGGCCAAA TTGCCGGTTT ATCTCAATGT GACGGCGCAG
GCCGAGCAAA GCAGTGAGAC CATCCACTCG ACCATGAGCG AACAGATGGT CTCTTCTGTG
CGCTGGAGCC AGACCATTGC CGCGCAATGG CACGACGGGA TTCGGTTCTG GCTGGAACTC
GGGCCCAAGC AGGTCCTGAA AAAACTGCTC GCCCCGAACC TCAAGGACCA ATCAGAGGAT
TGGGGAGCCT TGTCCGTGGG CAGCCTTCCG GATATGGCTG CCTTGGAGAC CGAATAA
|
|---|
| Protein sequence | MSQLPHAASV AAIFPGQGSQ EPGMGRDIAE HWPEAMELWK KAEAVAQAPL REIYWEGDGE
AMAETRYLQP ALTVTNLTVW GQVRSRTPVA CVAGHSLGEF AALAAAEVLS AEAVLELVTL
RGRLMAEAGQ GQDGAMAAVL KLQKSQVEEL VNTVTEETGQ ELRIANYNAP TQLVVSGRRS
AVERLGQLAK EHKGRAVPLP VSGAFHSPLM QGAAQELAGY MQRLHWREAK LPVYLNVTAQ
AEQSSETIHS TMSEQMVSSV RWSQTIAAQW HDGIRFWLEL GPKQVLKKLL APNLKDQSED
WGALSVGSLP DMAALETE
|
|---|
| |