Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1311 |
Symbol | |
ID | 8419140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1536393 |
End bp | 1537301 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037887 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003198177 |
Protein GI | 258405435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0220544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTT CGCAACGGCA ACTCGGTGCC GACGGCGTAT TGCTCATCGT GGCCCTGATC TGGGGAATCA CCTTCACCAT GATCAAGGAC GCCCTGGTCC ATGTCAGCGT CTTTGCCTTT CTCGGGCAGC GCTTCACCTT GGCCTCGGCC CTGTTTGTCC CTTTTCTTGT CTGGCGATGG CGTTGCTTTG CGTGGCGGGC GGTGGCCCAC GGCGCAATTT TAGGAATTTT CCTTTTTGGT GCCTTTGCCT TTCAGACCAT TGGCCTCGCT TTCACCACAG CCTCCAATAC CGCGTTTGTC ACCGGCATGA ACGTTGTTTT CGTACCGCTT ATAAACGGGC TTTTATTCCG GGTGCACATC CCCGTCCCAG TGCGAAGCGG GGTCATTCTG GCCGCTCTGG GGCTGGCCGG CTTGACCCTG AATACCGGAC TGGAAATCAA TCCCGGGGAC CTGGTGGTCC TGCTCTGCGC CGTGTGTATC GCCCTGCAGA TCATTTTCAC CGGGCGCTAC GCCGGGCGCA ATGATGTCTA CTGGCTCACG GCCGTCCAGA TTGCGGTCGT GGCCGTGGGC AGCACCGCCA TCGGCTGGAT TCGCGGCGAG GAGGTTTTCT TCTGGGAACC AAAGATTGCG TCTGCCCTTG TTCTTTGCGC CCCGCTGGCC ACTGTCTTTG CCTTTTGGGC CCAGACAGCC ATGCAGCGTT TCACACTCCC CAGCCGAGCC GCCCTTATCT TTTGCATGGA ACCGGTCTTT GGTGCCTTGT ACGCGTGCCT CGTCGGCGGA GAGCACCTCG GACCGTGGGC TGGACTGGGC GCGGCGGGAA TCTTTTTGGG TATGGTCTGC GCGGAAATGC CCGAGACATG GTGGGTGCGC CTCAAAGCAG GGTGGGGCAG CCGGGAAGCC GGCTCATAA
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Protein sequence | MQPSQRQLGA DGVLLIVALI WGITFTMIKD ALVHVSVFAF LGQRFTLASA LFVPFLVWRW RCFAWRAVAH GAILGIFLFG AFAFQTIGLA FTTASNTAFV TGMNVVFVPL INGLLFRVHI PVPVRSGVIL AALGLAGLTL NTGLEINPGD LVVLLCAVCI ALQIIFTGRY AGRNDVYWLT AVQIAVVAVG STAIGWIRGE EVFFWEPKIA SALVLCAPLA TVFAFWAQTA MQRFTLPSRA ALIFCMEPVF GALYACLVGG EHLGPWAGLG AAGIFLGMVC AEMPETWWVR LKAGWGSREA GS
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