Gene Dret_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1311 
Symbol 
ID8419140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1536393 
End bp1537301 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content60% 
IMG OID645037887 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003198177 
Protein GI258405435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0220544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTT CGCAACGGCA ACTCGGTGCC GACGGCGTAT TGCTCATCGT GGCCCTGATC 
TGGGGAATCA CCTTCACCAT GATCAAGGAC GCCCTGGTCC ATGTCAGCGT CTTTGCCTTT
CTCGGGCAGC GCTTCACCTT GGCCTCGGCC CTGTTTGTCC CTTTTCTTGT CTGGCGATGG
CGTTGCTTTG CGTGGCGGGC GGTGGCCCAC GGCGCAATTT TAGGAATTTT CCTTTTTGGT
GCCTTTGCCT TTCAGACCAT TGGCCTCGCT TTCACCACAG CCTCCAATAC CGCGTTTGTC
ACCGGCATGA ACGTTGTTTT CGTACCGCTT ATAAACGGGC TTTTATTCCG GGTGCACATC
CCCGTCCCAG TGCGAAGCGG GGTCATTCTG GCCGCTCTGG GGCTGGCCGG CTTGACCCTG
AATACCGGAC TGGAAATCAA TCCCGGGGAC CTGGTGGTCC TGCTCTGCGC CGTGTGTATC
GCCCTGCAGA TCATTTTCAC CGGGCGCTAC GCCGGGCGCA ATGATGTCTA CTGGCTCACG
GCCGTCCAGA TTGCGGTCGT GGCCGTGGGC AGCACCGCCA TCGGCTGGAT TCGCGGCGAG
GAGGTTTTCT TCTGGGAACC AAAGATTGCG TCTGCCCTTG TTCTTTGCGC CCCGCTGGCC
ACTGTCTTTG CCTTTTGGGC CCAGACAGCC ATGCAGCGTT TCACACTCCC CAGCCGAGCC
GCCCTTATCT TTTGCATGGA ACCGGTCTTT GGTGCCTTGT ACGCGTGCCT CGTCGGCGGA
GAGCACCTCG GACCGTGGGC TGGACTGGGC GCGGCGGGAA TCTTTTTGGG TATGGTCTGC
GCGGAAATGC CCGAGACATG GTGGGTGCGC CTCAAAGCAG GGTGGGGCAG CCGGGAAGCC
GGCTCATAA
 
Protein sequence
MQPSQRQLGA DGVLLIVALI WGITFTMIKD ALVHVSVFAF LGQRFTLASA LFVPFLVWRW 
RCFAWRAVAH GAILGIFLFG AFAFQTIGLA FTTASNTAFV TGMNVVFVPL INGLLFRVHI
PVPVRSGVIL AALGLAGLTL NTGLEINPGD LVVLLCAVCI ALQIIFTGRY AGRNDVYWLT
AVQIAVVAVG STAIGWIRGE EVFFWEPKIA SALVLCAPLA TVFAFWAQTA MQRFTLPSRA
ALIFCMEPVF GALYACLVGG EHLGPWAGLG AAGIFLGMVC AEMPETWWVR LKAGWGSREA
GS