| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1310 |
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| Symbol | |
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| ID | 8419139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1534431 |
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| End bp | 1536278 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037886 |
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| Product | protein of unknown function DUF255 |
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| Protein accession | YP_003198176 |
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| Protein GI | 258405434 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.92977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0463256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGA CTCTTGTCAA CCGGCTGGCC GAGTCCGGCA GCCCCTACCT GGAACAGCAT
GCCGGCAATC CCGTGGCTTG GCAGCCCTGG GACGATCAGG CCCTGGCGAC CGCACACCGT
TTGCAGCGGC CGATATTCCT GTCCATCGGC TATGCCACCT GCCACTGGTG CCATGTCATG
GAGCGGGAAT GCTTTGAAGA TACCGAGGTC GCCCACATCT TGAACACCGT CTGTGTCCCG
ATCAAGGTCG ATCGCGAAGA GCGTCCCGAT CTGGACACCT TTTATATGAG TTGTTGCCAG
GCGCTTTCCG GGCGAGGAGG GTGGCCTTTG AATCTGTTTT TGACCCCGGA TGGTCGGCCC
TTTTTCGCCG CGACCTATAT TCCGAAGCAG TCCCGTTTCA GCCAGCCCGG ATTACTGGAC
TTGCTCGTCA GTGTCCAGGA AGATTGGGTC CGGAACCGGG AGCAGATCGA ACAATCGGCC
ACTCGCCTGG TCAGTCATAT TCATGATCTG TTCAGCGACT CCAGCGGCCC GTTACCGGAA
AACGCGATTT TTGAGCAGGC CGTGCAAGAA TTGCGGCAGA ACCACGATGA CGACTTTGGC
GGATTCGGCA AGGCCCCCAA ATTTCCCACC CCGCATGTAT TGCTGTTTTT ATTGCGTTTG
TATGACCTTT CTCAGGACAG GTCTCTGTTG AATATGGTCG ACTCGACCCT TGAAGCGATT
TGTCGTGGCG GCATCCGGGA TCATATCGGC GGCGGTTTCC ACCGTTACTC TACTGATCGG
GCCTGGCACC TGCCCCATTT CGAAAAAATG CTCTACGACC AGGCCTTGCT CCTCATGGCC
TTGGCCGAGG GCCACGCCCG AACCCGCCGG GATCTTTTCC GGCGCGAGGC CGTGGCTGTG
GCCGAGTATA TGCTTGAGCG GCTCCACGAC GGAGACGGGG GGCTTTACTG CGGGGAAGAC
GCTGATACCG AAGGCGAAGA GGGGGCCTTT TATCAGTGGA CGGAAACCGA GTTGGAAGCG
GCGCTTCCTC CGGACACGTT TCGTGTTGTC CAGACTGTGG CGGGGATCCG TAGTGACGGC
AATATCCTGG ATGAAGCGAC GCGCCAGCGT ACTGGCAAAA ATGTCCTGGC CCGGGTGGCT
GATACCGCTG ACGCCGCCGA ACGGCTGGGG CTGAGCGAAG AACAGGTGCG CCTGGAGTGG
CACCGGGCCA TGGCCACGCT TGGCGGATTA CGCGCCCAGC GCCCGCAACC GTTCCTCGAC
GATAAGCAAT TGACGAGTTG GAACGGACTC GCTGTGGCCG CCCTGGCCCG GTCGGGCATC
TTGTTGGGCG AAGAGCACCT CATTGCCGCG GCCCGCGAAA CCGCGGACTG GGTCTTGGAG
ACCATGCAGC CCGAGCCGGG GCGATTATGG CACCGGGCCC GCAACAGACA CGCCGGAATC
CCTGGATTTC TTGAGGATTA CGCCTATTTT ATCTGGGGAC TACTGGAACT GGTGCAGACC
AGTGAGGGAC AGGATTACCG CCGCATCGCC TTGCGGCTGG CCGATACCGT GCTCTCCGAG
TTTGCGGACC TGAAGGAAGG CGGTTTTTTT CAGACCCATG CAGCGGCGCA AGAGCCCCTT
CTGCGCCTGA AAAAGGTCTT TGACGATGCC CTGCCCTCAG AAAACGCGGT CATGCTCTAC
AACCTGGTCC GATTGTACGG CTCCGGGCCG ACGAACGACT GTGCCCGAAA ACACCTGCGC
GGTGTTTCAG GGATTGTCCG CCAGCATCCG CAAGGGGCGG TGTTTACTCT GTTTGCGGCC
AGTTTCCTGC GGCCTTTGGA GGGGCACGGC ACCTGGCGGG AGAAATGA
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| Protein sequence | MSQTLVNRLA ESGSPYLEQH AGNPVAWQPW DDQALATAHR LQRPIFLSIG YATCHWCHVM
ERECFEDTEV AHILNTVCVP IKVDREERPD LDTFYMSCCQ ALSGRGGWPL NLFLTPDGRP
FFAATYIPKQ SRFSQPGLLD LLVSVQEDWV RNREQIEQSA TRLVSHIHDL FSDSSGPLPE
NAIFEQAVQE LRQNHDDDFG GFGKAPKFPT PHVLLFLLRL YDLSQDRSLL NMVDSTLEAI
CRGGIRDHIG GGFHRYSTDR AWHLPHFEKM LYDQALLLMA LAEGHARTRR DLFRREAVAV
AEYMLERLHD GDGGLYCGED ADTEGEEGAF YQWTETELEA ALPPDTFRVV QTVAGIRSDG
NILDEATRQR TGKNVLARVA DTADAAERLG LSEEQVRLEW HRAMATLGGL RAQRPQPFLD
DKQLTSWNGL AVAALARSGI LLGEEHLIAA ARETADWVLE TMQPEPGRLW HRARNRHAGI
PGFLEDYAYF IWGLLELVQT SEGQDYRRIA LRLADTVLSE FADLKEGGFF QTHAAAQEPL
LRLKKVFDDA LPSENAVMLY NLVRLYGSGP TNDCARKHLR GVSGIVRQHP QGAVFTLFAA
SFLRPLEGHG TWREK
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