| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1305 |
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| Symbol | |
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| ID | 8419134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1528136 |
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| End bp | 1529194 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645037881 |
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| Product | hypothetical protein |
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| Protein accession | YP_003198171 |
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| Protein GI | 258405429 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.122473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0347421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCG ATATCCCGTT TCTCCCCGAT CCCGAGTATC TTCAGGCCCT GACCCGCTTC
GAACCAGACC TGGCCACCCT CCATTTCAGC CTGCATGCTC CCGGCATCCC TGACGCCCGG
GCGCGACTCC GCGAGGTCGA AACCGACCGG CTGATCGATC TCTTGCGGCT GGGCCCGGGC
TGTGACCGCC TTGCGCTCCT GAACAGCCGC TTGCACACCC CTGCTTTTCT GCGTGAGCCA
GCGGCAAGGC GCCCGCTGCT CAATGCCCTG GAGCGGCTGC TTGCGGCTGA CGTCTGCCAG
GGGATCGTCG TGGCCGATCC GTACCTGCTC AATGTCCTGG GCGACGATTC GCCCCATCTG
GCCGGGGCGC TTCAGGCAGT GCCCAGCGTC AACGCTCGGC TGGCATCGGT CCACGCGATC
CGGGCCTGGC GCACTGTCAT CGAGGAGGCC GGGTTTTTGC CCCCGGCCCG GCTGGTTCTG
GATCGTGAAC TCAACCGGGA TCCAGGGCAG TTGGAAACCT TGAGCGCTGC CTGTCGCCGG
TTCTGGCCGG ATCAAGAGGT GTTTCTGCTC GCCAATGAGG GATGTCTTCC CCATTGCCCC
TACAAGCCGG CCCACGATGG CCAGATCGCT CTTGCGGCTT GCGACTTGAC GGCTGAGGCC
ACATTCGAAC TCAATGCCAC GGCGGGATGT GTCCGGCATT TGTTGCGCGA TCCCGCAGCT
GTGTTGCGCT CGCCGTTTAT CCGGCCCGAG GACGGCGAAC GCCTTGCCGG GATGGTCGAC
GGGCTCAAGC TGTGCGGCCG GAATATGGGG AGTCGTTTCT GCCTGCGCGT GCTCAGGGCC
TATGTACAAG GCCGATTTTC AGGCAATCTG CTGCAGTTGC TCGACAGCGT GGACTGGATG
GCCGAGGGAC TGGTCATTGA CAACGACACC CTGCCTTCAG ATTTTTGGGA CCAGTTGACC
GGGTGCGACG GGGACTGCCA GGAATGCGGA TATTGTCAGG CCCTGTTGCA GAGTGCTGGC
AGACCGACCC CTCTTGGGCC CTGGGGAAAC CATGCCTGA
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| Protein sequence | MRFDIPFLPD PEYLQALTRF EPDLATLHFS LHAPGIPDAR ARLREVETDR LIDLLRLGPG
CDRLALLNSR LHTPAFLREP AARRPLLNAL ERLLAADVCQ GIVVADPYLL NVLGDDSPHL
AGALQAVPSV NARLASVHAI RAWRTVIEEA GFLPPARLVL DRELNRDPGQ LETLSAACRR
FWPDQEVFLL ANEGCLPHCP YKPAHDGQIA LAACDLTAEA TFELNATAGC VRHLLRDPAA
VLRSPFIRPE DGERLAGMVD GLKLCGRNMG SRFCLRVLRA YVQGRFSGNL LQLLDSVDWM
AEGLVIDNDT LPSDFWDQLT GCDGDCQECG YCQALLQSAG RPTPLGPWGN HA
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