Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1296 |
Symbol | |
ID | 8419125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1517158 |
End bp | 1518345 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645037872 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003198162 |
Protein GI | 258405420 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00381796 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.151885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCCCC GGCGCCTTTC CCGGGAAATT TTCAAGGAGC TGGTCTACGT TTTCTCCTTA TGCCTGGGGT CGTTTTTGGC CCTGCTGTTG GTGGGACGTC TGCTCAAGCT CCGGGAACTC TTTTTGTCCC AGGATGTCGC ACTGCTGGAC CTGGGACAAT TGTTTCTCTA TCTCAGCCCC TTCTTTTTGC TCCTGCTATT GCCCATCGCC AGCATGCTCA GCGTCTTTTT GACCTTTCTG CGCATGTCCA CAGACCGCGA ACTTGTCGCC CTGCGTGCCG CCGGCCTGAG CCTGTGGCAG CTTTTGCCTG TGACGCTGCT CTTTTTATTG CTGTGTACCG CAGCCAATAT CGGCATCGGG ATCTACGGGG TCTCCTGGGG CATGGACAAC TTCCGGGCCA CAATTCTCGA TATGGCCAAG ACCCGAACCC AACTGGTCCT CCAGCCGGGG GTCTTCAATC AAGACTTCCC CGGGCTGACC ATTTTTGCCC GTCAAGTGGA CCGGGAGACT GGCGATCTAT CCACTGTCTT TGTCGAGGAT ACCAGTCGGG GGCAGGGGGC CATTGGTATC GTAGCCCCTC AAGGCAGCTT GACCACCGAC ACCCGCAAAG GGCAGGTGGT CTTTTCGCTC AGAAACGGCC GCCTCTACCG CCACGACCGT GATTCTGCGA GCGTTCTCGG CTTTGGCGAA TACCGGATCG CCCTGGATCT GGACAAAATC ATCAGCGGCG TCGAACTCGA GGAAAAGCGC CCCAAAGAAA TGTCCTGGAC CCGGCTCATG GACTACCGGC ATCAGGCAGA CCTGGCCCAG ACCCGGGACG CCACCTTTGA TCGCAAAGTC GATGTTGAAA CGCACAAACG CTTGGCCCTG CCCCTGGCCT GTCTGGCCCT GGGCATCTTT GCCATGCCCC TGGCCGCCCT GTTTGAAGGC CTTAAACGCC ACTTCGGCTT CCTGGTTTCC CTGGGCTTGT TTCTGGTCTA CTACGCCCTG TTCTCCGCAG GCCTGAGCCT GGGGGAAACA GGGACCCTCG CGCCAGCGAT CGGTTTGTGG GCCCCAAATA TCCTTTTTAT GGGACTCGGC GGCATTTTGT TTCACATGGC CGCACGCGAG CGAGGGGGCA AGCTGCTCGA GCGGTTCGGG TATATCCTCC GCAGTCTTCT TCCCCAGCGC AAAAGGAAAG CGGCATGA
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Protein sequence | MLPRRLSREI FKELVYVFSL CLGSFLALLL VGRLLKLREL FLSQDVALLD LGQLFLYLSP FFLLLLLPIA SMLSVFLTFL RMSTDRELVA LRAAGLSLWQ LLPVTLLFLL LCTAANIGIG IYGVSWGMDN FRATILDMAK TRTQLVLQPG VFNQDFPGLT IFARQVDRET GDLSTVFVED TSRGQGAIGI VAPQGSLTTD TRKGQVVFSL RNGRLYRHDR DSASVLGFGE YRIALDLDKI ISGVELEEKR PKEMSWTRLM DYRHQADLAQ TRDATFDRKV DVETHKRLAL PLACLALGIF AMPLAALFEG LKRHFGFLVS LGLFLVYYAL FSAGLSLGET GTLAPAIGLW APNILFMGLG GILFHMAARE RGGKLLERFG YILRSLLPQR KRKAA
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