| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1288 |
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| Symbol | |
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| ID | 8419117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1510147 |
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| End bp | 1511025 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037864 |
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| Product | UspA domain protein |
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| Protein accession | YP_003198154 |
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| Protein GI | 258405412 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.428871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC ACCTGCTTCT TACGGTCAGT GACGATGCGA GCAGTCACAG CGCTGTTCAG
TTCGTCGGCC AGTTTTTCAG CCACAAGGGA GTGGTCAAGA TCACTTTAAT GTATGTGGCC
CCCAATCCCG AAGATATTCT GGGCACCTCT GGAAAGACCC CAACTGGTGA GAAGCGCACC
GAGGTCACCC GGCAAAGCGC GCAATACCAG AAAAAGGGCC GGGCCGCCCT GGAGCGGGCC
TGGGAAAAAT TGCTGGCCGC CGGGATTCCG CCGAGCAATA TCTCCACGAT TTTTCGCTTT
CGGTCCTTCA ACACCACGGT CAAGGACATC GGTCAGGAGG GGGAAAAAGG TCTTTACGAC
GCGATTCTCC TGGGCCGGCG TGGCATTTCC CGGTTTGAAG AAATGCTCAG TGACAGTATT
TCCAAGCAGA TCCTGGAGGA GACATTGACG GTCCCCATCT GGATCAATCG GGAGATCGGT
CTGGAACGTT TCGGCGTTCT GCTTTGTGTC GACGGCTCTA ATCCTTCCTT GCGCATGGCT
GACCACGTGG GGTTCATGCT CGCTGAAGAG GTCCATCCGA TCACCTTGTG CCACGTCCAA
ACCAAGGGCG GGCCGGATCC GGCCTCGGTC TTTCGCAGCG CCCAGAGCAT GCTCGAAGAA
AACGGCGTCG ACGCCAAGCG TATCCAGACC CAAGTGCTGA CCGGCAGCGA TCCCGCCTCG
GCCATCGTCC AGGAAACCGA CGCCAAACGG TATGCGGCCG TGGCTGTGGG CAGCAGTGGC
GAGGAACACC GCGGGTTAAT GGGCCGCTTC TTCATGGGCT CGGTTTCACG CAGCCTGTGT
TCGCAGATCA CCGGCGCGTC GTTGTGGGTC TGCAAGTAG
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| Protein sequence | MEKHLLLTVS DDASSHSAVQ FVGQFFSHKG VVKITLMYVA PNPEDILGTS GKTPTGEKRT
EVTRQSAQYQ KKGRAALERA WEKLLAAGIP PSNISTIFRF RSFNTTVKDI GQEGEKGLYD
AILLGRRGIS RFEEMLSDSI SKQILEETLT VPIWINREIG LERFGVLLCV DGSNPSLRMA
DHVGFMLAEE VHPITLCHVQ TKGGPDPASV FRSAQSMLEE NGVDAKRIQT QVLTGSDPAS
AIVQETDAKR YAAVAVGSSG EEHRGLMGRF FMGSVSRSLC SQITGASLWV CK
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