| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1287 |
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| Symbol | |
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| ID | 8419115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1506380 |
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| End bp | 1509622 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037862 |
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| Product | protein of unknown function DUF748 |
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| Protein accession | YP_003198153 |
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| Protein GI | 258405411 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.701723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGACC TTCGCGCGCG CTGGAAGCGG CTCCATTGGA TCATAAGGTC ATTGGCTCTT
TTCTGTCTGC TGCTCGGACT CTACGCTGCA GCCGGATTCT GGGGGGTACC CGCGCTGGGA
GGCTATCTTC TGGAAAACCA GGTCGCCGAG CGGCTGGAAA AAGAAGTTGC TCTGGACCAG
CTCACATTCA ACCCCTTTAC GTGGCGTTTT GAGCTTAGCG GCCTGGAGGT CAGCGATGCT
GATTTTTCAG ATCCCGTGCT TGCCATGGGC GGCTTGCAGG GGAATCTCCA ATTTGGGGAC
CTGCTCGATT TGGCTTTGCG GCTCGAGGAC CTTCAATGTC GTGGGCTGCA GGTCCAAACG
GCCGGTTTTG ACGTGCCAGG GGCCCCGTTC ACCCTGGACT TGAACGGAAT GCGGGCCGCG
ACACGGGTGG GCCTTGAACG GTCCTCGGAA CCGGACTCCT CGTGGATGCC TGTTGTCAAC
GCGACTCTCG CAATCAGCGA ATGTACCCTG AGCGAACCCG AACACGGCAC GGTCGTCTCA
CTGGCCTCCG GTGCGGTGGA ACTCGAGCGT TTTGCGCCGC TGGAAAAGAC GGCCACGGTG
AACGCCATCA GCCTGCAGGC CCCTTTTGCC AAAGTGGTGC GCCGTGGTGA TGGAAACCTC
AATTGGGCCG GCTATTTCGT GGCGTCTGCT TCGGCCAATG CCACAGCGCC TGACCCGCCC
TCCTCTCCTT TTGCCTTTTC CTTGGCCTCA TTCACCGTCG CCAATGGTAT CGCCCGTTTC
GAGGACCGCA GTGTCGCCTC GACTATCGAG AAAAGGGTTG CCCTGAACGC AACGCTCAGT
GATTTGAGCA CCACCGCGTC TTCCCCAGCC TCGTTCCAGG CGCGGGCACG GACCAAGGCC
GGAGAAACAA TTGAGGTCAA AGGCGATCTG CGTCTGGCCC CCGCGCTTGC GACCAACGGC
TCACTCGCGT TTGACGGAGT CTCCCTGCCG CACTACGGGC CCTATTACCA GCCTGCCCTG
CCTTTTGAAC TCGCCTCAGG CCAAGTCCAG GGGCGGACCA CGTTTCGTTT CGCCCCTGAA
AGCGATGAAC AGTTGCATCT TGCTGGATCT GATCTTGCGA TCTCGGGGCT GAGCCTGCGT
GATCCGCAAC TCGGCACAGA ACTGTTCTCT TTGCCGCAGG CGAATGTGAC CAACGGCACA
GTGCGCCTTG ATGGGCAAGC GGTGCACATT GCGGCTGTGG ATCTGCAGGG CGGCAAGGTC
CATCTCCAGC GTCATGCCGA CGGCCAGCTG CACCTCATGC GCCTGTTGGG AGAGGTCGGT
AGCCAAAAAG CTTCGACTGC AACCTCGGCC CACGCCGGGG CGGGCCGGGA TAAAGCGGAC
GCTTCCCCGG CCTGGCGGGT CCGGGTCCAG GAGAGTACTC TGGCCGACTG GACTGTGCGC
TGGCAGGATG AGGCCGCGCC CCGTCCGGAT GCACTCACTG TTTCCGACAT CGATCTTGCG
CTGCGGCATA TCGATTCAGC CCTGGCCACT CCCCTTGAAT TGGCGTTGAG CGGAAGTCTG
AACACCGGGG GGAATCTTAC CCTGGACGGG AATCTGGATC CGAAAACACT GACCGGGACC
GGCTCCTTTG CCCTGAACGA TCTCGATATC CGCGCCGGCC GGATGTATGT GCCGGGGTCG
ATGCAACTCT CCTTGCGCCG GGGGGTTGTA GACGGAACGG GGACCTGGAA ATTGCGTCCT
GGAGACGGGA TTGCGCCTCA GCTGAGCGGG GATTTGGCGC TCAAGGAGTT CGAGGCCGGA
GCCAGCGGTG ATCCCGATAC ACTGCTTGGG GTCACGCGAC TGGCGTGTAA CGGGTTCAGC
GTGGCTCTGC CGGAGCAGGC CATCACAATC CGCAAAGTCC AACTGGTCGA ACCCTACGCC
GACCTCAAGG TCAATGCCAA CGGGCGACTC AATCTCCGTA CCGTTTTCTC TGGCGAACCG
GCGCACGAGA CAAACGCCAC CCGCTCCGCC ACGCCTCGCG CATCGGATAC GTCCGCACCA
CAGGAAAACG CTCGGGAACG TAAGTTGGCT GTGAACCAGA TTGAGGTCGA AAAAGGGTAT
GTGGCCTTTG CCGATCAGAC ATTTTCTCCG GCCATGTCCA CCTCGTTGCA AGATATTTCC
GCCTCGCTGG ACGAATTGGT CCTGGGATCT CCCGAGCCCT CGCGCTTGAC GCTGAAAGCC
GGGATCGAAG GCCACGCCCC GCTCTATCTC CAGGGGCAAA TCGCGCCGTT TGCACGTCCA
GTGCAATCCG ATCTGACCCT GACCCTGTCC AATCTGGATA TGGTCACTTT GAGTCCGTAT
TTGCGCAAAT ATCTGGCCTA TCCGGTGTCC ACCGGCCAGC TTTCCTGGGA ATCCTCCATT
GCAACCAAGG AAAATACCTT GCAGGCCTCC AATGCGTTTC GCTTTGAACG TTTTGTGCTG
GGAGAGAAGG TCGACGACCC CGATGCCCCG AACATCCCGG TCAAATTGGC CTTGTCGCTC
TTGCAGGACG GCCAGGGGGA CATGGACCTC AACGTTCCGG TCGAAGGCGA CCTCAATGAT
CCCGGATTTC GCCTTGGCGG GGTGATCATG AAGGCGATCA TCGGGGTTTT TCGGAACATT
GCCTCCGCGC CCTTCAGCTT CATCGGCTCC ATGTTCGGGA GCGGCGAGGA TGTCAGCTTC
GTCTCCTTTG CCCCGGGTCG GGCCGATTTG ACGGACATGG CCCGCACCAA GCTCCAAACC
GTGGCCGAAG CCCTGAAAAA ACGGCCTCGA TTACAGATCG ACCTCACAGG TCTGGTCGAT
TCGGCAGCCG ATCGTCAGGC CATGCGTGAC CGTGCTTTCG ACAACCGGAT CAAAGGGGCG
AAATATCGGG AATTGGAGCA GGCCGGTGTG GCGCCGCAGG ACATTGGAGC GGTCTCCTTT
GGTGATCAGG AGGAATACCG AAAGTACGTG GTTCAGGTTT ATCAGAAAAT CCTGAACGAA
GCCGGCGACA AGGCGCCCGC AGATGAGGAT CTCTCCCTGG AGACAATGGA AGAGCGCATC
CGGGCTACGA TCGCGGTCAC GGCCAATGAA TTGCAGGCCT TGGCCGCGCA ACGTACTGCG
GTGGTCCAAT CTTTTCTCAT CGCTGAGCAG GAGGTCGCGG CAGAACAGGT CTTTCGCAAG
AGTGCTGACA CGGCCATCTC CGAGCAGGAC AAGGCCAGGG TGCGCCTTGG TCTCCACGGT
TGA
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| Protein sequence | MGDLRARWKR LHWIIRSLAL FCLLLGLYAA AGFWGVPALG GYLLENQVAE RLEKEVALDQ
LTFNPFTWRF ELSGLEVSDA DFSDPVLAMG GLQGNLQFGD LLDLALRLED LQCRGLQVQT
AGFDVPGAPF TLDLNGMRAA TRVGLERSSE PDSSWMPVVN ATLAISECTL SEPEHGTVVS
LASGAVELER FAPLEKTATV NAISLQAPFA KVVRRGDGNL NWAGYFVASA SANATAPDPP
SSPFAFSLAS FTVANGIARF EDRSVASTIE KRVALNATLS DLSTTASSPA SFQARARTKA
GETIEVKGDL RLAPALATNG SLAFDGVSLP HYGPYYQPAL PFELASGQVQ GRTTFRFAPE
SDEQLHLAGS DLAISGLSLR DPQLGTELFS LPQANVTNGT VRLDGQAVHI AAVDLQGGKV
HLQRHADGQL HLMRLLGEVG SQKASTATSA HAGAGRDKAD ASPAWRVRVQ ESTLADWTVR
WQDEAAPRPD ALTVSDIDLA LRHIDSALAT PLELALSGSL NTGGNLTLDG NLDPKTLTGT
GSFALNDLDI RAGRMYVPGS MQLSLRRGVV DGTGTWKLRP GDGIAPQLSG DLALKEFEAG
ASGDPDTLLG VTRLACNGFS VALPEQAITI RKVQLVEPYA DLKVNANGRL NLRTVFSGEP
AHETNATRSA TPRASDTSAP QENARERKLA VNQIEVEKGY VAFADQTFSP AMSTSLQDIS
ASLDELVLGS PEPSRLTLKA GIEGHAPLYL QGQIAPFARP VQSDLTLTLS NLDMVTLSPY
LRKYLAYPVS TGQLSWESSI ATKENTLQAS NAFRFERFVL GEKVDDPDAP NIPVKLALSL
LQDGQGDMDL NVPVEGDLND PGFRLGGVIM KAIIGVFRNI ASAPFSFIGS MFGSGEDVSF
VSFAPGRADL TDMARTKLQT VAEALKKRPR LQIDLTGLVD SAADRQAMRD RAFDNRIKGA
KYRELEQAGV APQDIGAVSF GDQEEYRKYV VQVYQKILNE AGDKAPADED LSLETMEERI
RATIAVTANE LQALAAQRTA VVQSFLIAEQ EVAAEQVFRK SADTAISEQD KARVRLGLHG
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