| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1281 |
|---|
| Symbol | |
|---|
| ID | 8419109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1501283 |
|---|
| End bp | 1502677 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645037856 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003198147 |
|---|
| Protein GI | 258405405 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.133559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.330956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA ATGCACACCA TTTTGACGTT ATTATTGTCG GTGGCGGACC GGCTGGTCTG
TTTGCCGCCT ATTATCTGGC CGAACATTCG GACAAGAAGG TCCTGCTGCT GGAAAAGGGA
AAAGACCCGC GCAAGCGGTA TTGCCCGATC ACTGCGGAGC AGGAATGTCT GCGCTGCCAA
CCGTGCAACA TCCTTTCCGG TGTCGGTGGC GCCGGGCTGT TTTCCGACGG CAAGCTCAAT
TTCATCCACA AATTGGGCAA GACCGACCTG ACCCAATTCA TCTCCAAGCC AAAGGCCCAG
CGGCTGATCG ACGAAACAGA GTCGATTTTC AACACCTTTG GCATGGACGG GCCGGTCTTT
CCCACTGATA TGGACACAGC CCGGGAAATC CGCAAACAGG CCCGCAAAGA CGGCATCGAA
CTTTTGCTGA TCAAGCAAAA ACACCTTGGC AGCGATTGCC TCCCCGGCCA TATCGCCGGC
ATGCACGATT ATGTGGAACA AAAAGGGGTG CGCATCCACT GCAACGAATC CGTGGAAGAA
GTGCTGGTGG ACAACAACCG TATTCAAGGC GTGCGCACCA GCAAAGGGAA CTATACTGCC
GAGTCCGTGA TCCTCGCTCC GGGACGCGTC GGCGCAGAGT GGATGGGCAA AATCGCCCAG
GGTTTGGATA TTCCGCTCAG TCAGCGGGGA ATCGAGGTCG GGGTCCGGGT CGAGGTCCAC
AACGAGATCA TGCAGGACCT GACCGATGTC ATCTACGACC CGACCTTTTT CATCCAGACC
AGCAAATACG ACGATCAGAC CCGGACCTTT TGCACCAACA AGGGCGGCTT CGTCTCCCTG
GAAAACTATC AGGACTTCGT CTGCGTCAAC GGGCACGCCT ACCTGGACAA AAAATCCGAA
AATACCAATT TCGCCTTCCT GTCCAAAGTC GTGCTCACTG AACCGGTCAC GGACAACCAG
GCCTACGGAG TCTCCATTGG CAAGCTGGCC TCGCTTATCG GGGGCGGCCG TCCGATCCTG
CAACGCTTCG GCGACCTCAA ACGGGGACGC CGTTCCACTT GGCACCGTAT CCGCAAGGGA
TATATCGAGC CGACCCTGAA AAATGTGGTC TGCGGCGATA TCGCTATGGC CTTGCCGGAA
CGGATTTTGA CCAATCTCGT GGAGGGATTG GAAAAACTCA ACCACGTCGT TCCCGGCGTC
GCCAATGAAG AAACCTTGCT GTACGCCCCG GAAATCAAGT TTTTCGCCAC CCAGGTCCAG
ACCAACAGCC GCCTGGAAAC CAAAGTGCGC GGCCTCTACG TCGCAGGCGA CGGTCCCGGT
GTGGCCGGAA ATATCGTCTC CGCCTCGGCG ACAGGCTTGA TGCCGGCCAA AGCTATCTTG
GGACACGAGA TCTAG
|
|---|
| Protein sequence | MTPNAHHFDV IIVGGGPAGL FAAYYLAEHS DKKVLLLEKG KDPRKRYCPI TAEQECLRCQ
PCNILSGVGG AGLFSDGKLN FIHKLGKTDL TQFISKPKAQ RLIDETESIF NTFGMDGPVF
PTDMDTAREI RKQARKDGIE LLLIKQKHLG SDCLPGHIAG MHDYVEQKGV RIHCNESVEE
VLVDNNRIQG VRTSKGNYTA ESVILAPGRV GAEWMGKIAQ GLDIPLSQRG IEVGVRVEVH
NEIMQDLTDV IYDPTFFIQT SKYDDQTRTF CTNKGGFVSL ENYQDFVCVN GHAYLDKKSE
NTNFAFLSKV VLTEPVTDNQ AYGVSIGKLA SLIGGGRPIL QRFGDLKRGR RSTWHRIRKG
YIEPTLKNVV CGDIAMALPE RILTNLVEGL EKLNHVVPGV ANEETLLYAP EIKFFATQVQ
TNSRLETKVR GLYVAGDGPG VAGNIVSASA TGLMPAKAIL GHEI
|
|---|
| |