Gene Dret_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1280 
Symbol 
ID8419108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1500050 
End bp1500799 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID645037855 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003198146 
Protein GI258405404 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0429552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.627114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA CCAGAAAAAT CATCCATATC GACGAAGACC TTTGCGACGG CTGCGGCCAG 
TGTGTGCCCT CCTGTGAGGA AGGGGCCATC CAGATCGTCA ATGGCAAGGC CAAACTGGTC
GCGGACAAGT ATTGCGATGG CCTCGGCAAT TGCCTGGGCG AATGCCCTCA GGGGGCGATT
ACCATGATCG AACGTGAAGC CGACCCCTTT GATGAAAAGG CTGTGGAGGA ACTCCTCGCC
GCGCAGGGGC GTGCTGTCCA GCAGCCCTCC TCCGGCGGTT GCCCCTCTCG CCAGCTGCAT
TCCTTTTCGC CGTGTCAGCA GGCAAATGCG CCGACCACGC AGAGTGGTTC CAGTTTGTCG
CACTGGCCGG TGCAGATCCG GTTGGTCCCC GCGCATGCGC CGTTTCTGGA CCAAGCCGAT
CTCCTGGTCA CCGCCGATTG CGCCCCTGTG GCCTGCGGAG AGTACCATTC CTTGCTGCAA
GGCAAAGTGG CCTTGCTCGG CTGCCCCAAG TTCGACAATG CCGAAGAATA TATCGCGAAG
TTTGTCGAGA TTTTCACCAA GGCCGATATC CGTTCGGTGA CCGTGCTGCA TATGGAAGTG
CCCTGCTGTT CGGGCCTGCC GAAAATCGTG GCCGAGGCGC GCCGAAGAAC CGGCGTGGAG
GTGCCTGTGG AAAATGTGCT CGTCTCCACC CGCGGGGAAA TCCTCTCCCG TGAGCCGCTG
CCGGGTCAGG AACTGGTCAT GGCCCAATAG
 
Protein sequence
MKTTRKIIHI DEDLCDGCGQ CVPSCEEGAI QIVNGKAKLV ADKYCDGLGN CLGECPQGAI 
TMIEREADPF DEKAVEELLA AQGRAVQQPS SGGCPSRQLH SFSPCQQANA PTTQSGSSLS
HWPVQIRLVP AHAPFLDQAD LLVTADCAPV ACGEYHSLLQ GKVALLGCPK FDNAEEYIAK
FVEIFTKADI RSVTVLHMEV PCCSGLPKIV AEARRRTGVE VPVENVLVST RGEILSREPL
PGQELVMAQ