| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1268 |
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| Symbol | |
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| ID | 8419096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1486625 |
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| End bp | 1487848 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037843 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003198134 |
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| Protein GI | 258405392 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.15473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0747469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAT CCACAGATTT CGACATCTGC CTTTTCCGCC AACCGATCCT GAACGTCCGC
CTGGATGTCT GGGGATACGC TGTGGACCTG TGCAAAAGCA ATGACCTGGA ACACGGCGAA
TGCACGTCAG CCCTTTTGGA CCCCGACGCC CTCCAAAACG GTTTACAATT GGCCGAGCAT
ACCGCGCCCA CCCCGACCAT CAAATGCGTC CACCTGGATC AATCCCTGCT TGAAAACCAT
GAACGCGTTG AATTCCCCCC GGACACGCTG GTCGCCTTGA GCGAAAAAGC GACGCCGAAC
GCCGCTGTCC TCGCCCTGTG TGAGGCCATG CAGAACCGGG CATTGCTCGC CGTGGACATC
GCCAGCAATA CCGAACGATT GCAACCTTTT GTCCGTCTGG CGGACATCGC TATCGTTGAT
CTGCGCCAAT TCTCCGAAGA GGGGCTGCGC CGCAAGGCCG CTCAACTCCA CGAATGCAAT
GTCACGCTTT TAGCCCGCAA TGTGGACGGT TACGCCAGTC TCCAGCAGGC CCGTGAACTC
GGCTTCGAAC TCTTCCAGGG CTTCTTTTTT ACCAATTCAC GGACGATCAG CCATAAGGAT
CTCTCCACCA GCCAAGTGGC CAAGCTCCAG CTTTTGGAGC AGTTGGGGCA TCCGGACAAC
CTCGAAGAAC TGACTCTGAC CATCAAAAAC GACGTCTCCA CCAGTTACCG GCTGCTCAAG
TACCTCAATT CCCCCGGCAT GGGGCTCATG AACGAAGTCA AATCGATTCC CCACGCCGTG
AAGCTCCTGG GCGAAAAAAA GATCAAGAAT TGGATCCGGG CTCTGTTGCT CTCGGAAGTC
ATCCGGGATG ACAAACCTGG GGAACTGATC AACCTCTCGG TCAGCCGGGC GGCCTTCTTG
CAATATCTCA GCCAGCAAGC CAAGACCCCG TTGCCCCCGG AATCCATGTA TCTGCTGGGG
CTGTTTTCCC TGCTGGACGT CATCCTGGAC CAGCCCATGA GCCAGGTCCT CAAGTATCTC
GCCCTGGACG ATTCCATCCG CTCGACGCTG CTGGGGGACA ACACCCAGGA CAGACAATGG
CTTGATCTCG CTATCCGCCT GGAACGCGGC GATTGGACCG CTGTCCAGTT CCATCTCGCC
AGCTTGGGGC TGACTGCTGA CGAAGTAACC CAGGCCTATA CCGCCGCTTT GATTCATACC
CACAGTTTCT TTTCCCACAG TTAA
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| Protein sequence | MSESTDFDIC LFRQPILNVR LDVWGYAVDL CKSNDLEHGE CTSALLDPDA LQNGLQLAEH
TAPTPTIKCV HLDQSLLENH ERVEFPPDTL VALSEKATPN AAVLALCEAM QNRALLAVDI
ASNTERLQPF VRLADIAIVD LRQFSEEGLR RKAAQLHECN VTLLARNVDG YASLQQAREL
GFELFQGFFF TNSRTISHKD LSTSQVAKLQ LLEQLGHPDN LEELTLTIKN DVSTSYRLLK
YLNSPGMGLM NEVKSIPHAV KLLGEKKIKN WIRALLLSEV IRDDKPGELI NLSVSRAAFL
QYLSQQAKTP LPPESMYLLG LFSLLDVILD QPMSQVLKYL ALDDSIRSTL LGDNTQDRQW
LDLAIRLERG DWTAVQFHLA SLGLTADEVT QAYTAALIHT HSFFSHS
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