| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1245 |
|---|
| Symbol | |
|---|
| ID | 8419073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1460116 |
|---|
| End bp | 1460901 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645037820 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_003198111 |
|---|
| Protein GI | 258405369 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00955102 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA TACTTTTGCT GGCATTATGT CTGGGCTGTC TGCTCGGTCC CGCTGTGACC
ACCGGGTGGA CCGATATTGT GACCACCACC GAACACTATA CCGTGGATGG GACCCGCTAT
GAGGGCTTTT TTGCCCGCAA CACCCAACTG GGCAACATGC AGCCTGTGGT CGTCCTCATC
CACGATTGGG ACGGGCTGGG GGAATATGAG CAAACCCGAG CCCGCATGCT GGCCCGGGCC
GGATACGCCG CTTTTGCTGT TGATCTCTAC GGAAAAGGCG TCCGGCCCCA TACCCTCGAG
GCCAAGCGGA CCCGCAGCGG TGCACTCTAC AAGGACCGTG AAGAGTTTCG AAAACGGTTG
TTCGGCAGCC TTGCAGCCCT GGACGGCCTG GAGGGAGTGG ATCCCGGCCG GGTCGTAGTC
CTAGGGTATT GTTTTGGCGG TGCGGCAGTG CTGGAACTCG CCCGAGCGGG CGCGGATCTT
CAGGGAGGGA TCTGTTTTCA CGGCGGGCTG ACAACCCCGG AAGGACAGCA TTACGCCGAA
CTCAAAGGGC CGCTGCTTAT TTTGCACGGG ACCGAGGACG CGGTCGCTCC GATGGAGGAT
GTCCTCAGCC TGACCCGGGA TCTGGATACC GTAGATGCCA CGTTTCGCAT CAAGCTCTAC
AGCGGCACCG GCCACGCTTT TACCGAATGG TCAGGGGACC GTTACGCGGC CACGGCCGAT
CTCGATTCCT GGCAGGAATG TCTGCGTTTT CTGGAGGCCA GGCTGGGAAA CGGGACTCAA
CGGTGA
|
|---|
| Protein sequence | MIRILLLALC LGCLLGPAVT TGWTDIVTTT EHYTVDGTRY EGFFARNTQL GNMQPVVVLI
HDWDGLGEYE QTRARMLARA GYAAFAVDLY GKGVRPHTLE AKRTRSGALY KDREEFRKRL
FGSLAALDGL EGVDPGRVVV LGYCFGGAAV LELARAGADL QGGICFHGGL TTPEGQHYAE
LKGPLLILHG TEDAVAPMED VLSLTRDLDT VDATFRIKLY SGTGHAFTEW SGDRYAATAD
LDSWQECLRF LEARLGNGTQ R
|
|---|
| |