| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1231 |
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| Symbol | |
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| ID | 8419059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1444136 |
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| End bp | 1445461 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037806 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003198097 |
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| Protein GI | 258405355 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0692085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.545036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTTG CTGTCCTCCA GACCGTCCAA CAGCGCGTGG ACGATTTTCT GGTCAAATGG
AAAACGAACA TGGACCGGGC CGGTTACCTC GAATCGACCA CCGCCAAACG GGAGGACTGC
ATCCTCTCCT TCCAATGGTT TCTCGATCCG CTATGTGCCG CTGTGGCAGA TGCCGGCCCA
TCTGTGGATT TTTATGCCCT GGTCCACGAT ACCTCTGGCT GGGCGGACAA AATCCTGGCC
ACCTCTCGGC GACATCGGTT CCGCGGCCTG AGCGCGGCCA TGTTTTTCGG GTGTTTCAAG
ACCCTGGTCC TTGCTGTGGA GGAAATGGTC CATGAAACGA GCTATTCCAC GGCCCAAAAA
ATGGAGGCGG TCCAGATCCT GCGCTCTTGG GCCGATGCCC TGGAAACCCA CATTGTCAAT
GATTGGACGA CCCTGAGCCA ACGCGAAGCC GATGAGCGGC TGGACATTTC CAACCGGCAT
TTGACCCTGG AGAAAAACAA ATATGAAAAT ATCCTGGCGA TCATCTCCGA GTTGGTCGTC
GTGGTTGATG CGCATGGGGC CATTATTGAA TTCAACCGCA CAGCGGCGGA GCACCTCACT
TTGGAACAGA TCGAAGGCAG CCCGGTCTGG GAGGTTCTCG GTCTGGACGT CGACAACATG
GAAGAATTGG TCCGCACCTA TCCCGCCGAA TACGGCCATG AAATCGAAAC CAGCTTTGCT
CCGTATTTTT TTGAACTCCA CCTCGCCCCC CTGCAGCGCA TCAGTCTCGC TTCAATGAGT
TATCTCTTGG CCCTGCGCGA TATCAGCCCC CATGTCCGAC AGCGGGAAAT CCTGGAAAAC
CAGGTCCACG CCCGGACCAC TGATCTGGAA AAAGAAAAAG CGCAGTTGGA AGAGATGAAT
ATCACCCTGC GCCAGGTCCT GAAAAACATT GACAGTGAAC TGGACAAACA CAAGGCGGAT
ATTGCCCGCC GGGTGGAGAC TACACTGCTT CCGGCCGTAC AGCGACTGCG CAGCGAAGCC
GGGACCTCGC TCTCCCAGGA CCATTTGCAT ATCCTCGAAG ATCAGCTTCT GGCCCTGTAC
GCGGAGGCCC CTGGCGGGCA CGCTGATCCC TTACTCCTCA AACTCTCCCC TACCGAAATG
AAGGTTTGCC GGCATATTCA GGTCGGACAC TCGACGAAGG CCATTGCCAA GGCGTTGCAT
CTCTCTGAGG GAACCGTGCA GTCTCACCGG AAGAGTATTC GCAAGAAGCT GAAAATACAG
AATAAAAACG TTAATTTATA CACATATCTC CAGGATCGGG GGCAGGCTTC GGGTGCCCCT
GCTTGA
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| Protein sequence | MPLAVLQTVQ QRVDDFLVKW KTNMDRAGYL ESTTAKREDC ILSFQWFLDP LCAAVADAGP
SVDFYALVHD TSGWADKILA TSRRHRFRGL SAAMFFGCFK TLVLAVEEMV HETSYSTAQK
MEAVQILRSW ADALETHIVN DWTTLSQREA DERLDISNRH LTLEKNKYEN ILAIISELVV
VVDAHGAIIE FNRTAAEHLT LEQIEGSPVW EVLGLDVDNM EELVRTYPAE YGHEIETSFA
PYFFELHLAP LQRISLASMS YLLALRDISP HVRQREILEN QVHARTTDLE KEKAQLEEMN
ITLRQVLKNI DSELDKHKAD IARRVETTLL PAVQRLRSEA GTSLSQDHLH ILEDQLLALY
AEAPGGHADP LLLKLSPTEM KVCRHIQVGH STKAIAKALH LSEGTVQSHR KSIRKKLKIQ
NKNVNLYTYL QDRGQASGAP A
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