Gene Dret_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1227 
Symbol 
ID8419055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1439630 
End bp1440430 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID645037802 
Productmolybdopterin-containing oxidoreductase membrane anchor subunit 
Protein accessionYP_003198093 
Protein GI258405351 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.493563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA TGGAACTTCC CCTCGTTTTT TTTACCGTCC TCAGCCAATT GGCCATAGGC 
ATGGCCTTGA TGAGCACTAT CCGGCAATTC GCCACAAGCA ACGGCGCCAT TGGTCCGGTA
CGAAACGAAT GGTTGGTGGC TGCCGGGGTG GTCCTGCTCG GGCTGGTCGC CTCCCTGGCC
CACCTCGGCC ACCCCACTGG AGCCGCCCGG GCTCTGGTCC ATCTGGGTAA AGCCTGGCTC
AGCCGCGAAG CCCTCGGGGT TGGCATCTTT CTGGCTCTGA CGGTCTTGAC CGGGTTGAGC
GCGCGCAAAC AGGCCAATCC GGTGTTAGCC GCTCTGGCAG TGGCCGCCGG TCTGCTGACC
TTGTTGTTTA CCGGGATGAC CTATGCCCCG CCGAGCTATC CGGCCATCAA CAATGTCCTG
CCTTTTGTCT TTTTCCTGTT CACGGTCTGC ATCCTCGGTT CCGGGTTTGG CGTCTACTTC
ACTCCTGAAT CCAAGCGCCC CATGTTGACA CGGATTCTGA CCGTGAGCCT GATAACCGCG
CTGGTGGTCT ACCTTATCGT GCCCTGCGTC TGGCTCTCCG GGGGGACGGT TATGGCCCTG
ACCGGCAAGG CCTGGATCGG TTCCTGGATC TATTGGTTGC GCATCGTGGT CGGTTTGGCA
CTGCCGCTGG TCGTCCTTGC CAAAACCCGG TCGATCCCTT TGTGGTTGCC CTTCGTGCTC
CTTGCTGGAG AACTGTTGGG GCGTATCGTC TTTTTTAGTC AAACCTTGCA CTCAGCCGCA
AACATGGGCG GCCTCTACTG A
 
Protein sequence
MNGMELPLVF FTVLSQLAIG MALMSTIRQF ATSNGAIGPV RNEWLVAAGV VLLGLVASLA 
HLGHPTGAAR ALVHLGKAWL SREALGVGIF LALTVLTGLS ARKQANPVLA ALAVAAGLLT
LLFTGMTYAP PSYPAINNVL PFVFFLFTVC ILGSGFGVYF TPESKRPMLT RILTVSLITA
LVVYLIVPCV WLSGGTVMAL TGKAWIGSWI YWLRIVVGLA LPLVVLAKTR SIPLWLPFVL
LAGELLGRIV FFSQTLHSAA NMGGLY