| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1222 |
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| Symbol | |
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| ID | 8419050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1433729 |
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| End bp | 1435141 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645037797 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003198088 |
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| Protein GI | 258405346 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.117509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAC AACTCGTTTT GATTATAGAC GATGAATTGC AGATGATTCA GGGCCTCAAA
CGGATTCTGG AATACGAACT CGACGATGTC GACATCCATG TTTGCGGAGA TTCCGAGCAG
GTGCTGCGCC AACTCCTCGA GCACCAGTAC GACCTGGTTC TCCTGGACGT ATGCATGCCA
GGCATCGGCG GGATGGAACT CTTGCCAAAG ATAAAAAATC TGACCCCGGA TATAACGGTG
ATTATGATGA CCGCATTCGG CAATGTCGAC CTGGCCGTGC AGTCCATCAA GCAAGGAGCC
TCGGATTTTG TTTGCAAGCC GTTTGAAATA CCGGACTTGG TCGCTGTTTT AAAACGCAAC
TTGAAACGGC AAAAATTGCG TAGCGATCAG GACAATTGGG CCGAAAGTCC ATTGGCGGCG
GGATTAAACG CCATCGTCGG GCAATCCAAA CCCGTCCAGG ACCTTTTAAA CCTTATCAGT
TCTGTCGCCA AAACGGATTA TTCGGTACTC GTCCGCGGAG AAAGCGGGAC CGGAAAAGAA
CTTGTGGCTC GAGCCATTCA CCAGTTAAGT CCCAGAGGGG ACAAACGGTT TGTGACGGTG
AACTGCCCGG CAATTCCCGA ACATTTATTG GAAAGCGAGT TATTCGGATA CAAAAAAGGG
GCTTTCACCG GGGCGACGCA GGACAAAAAA GGACTTTTCC AGGAAGCCAA CGGCTCGACC
CTGCTTTTGG ATGAAGTCGC GGACATTCCC ATTTCCGTGC AGACAAAACT CTTACGCGTG
CTTCAGGAAC AAGAGATCCG TCCTCTGGGT TCGAATAAAG ACCTTCCGGT GGATGTCCGT
ATCTTGTCCT CGACCAATCA GGATTTGGAG TACAAACTCC ACACCAAAGC ATTTCGCGAG
GATCTCTTTT TTCGGTTGAA TGTTGTCACT ATCAAGACAC CGCGCCTCGA AGAAATTCCA
GAAGATATCC CTTTACTGGC TGATTTTTTT ACCCGGCAGG TCTGCAGCGA ACTCAACATA
TCACCGAAGC CATTTTCTGC TCAGGCTATT GCCGCCTTAC AACAGAGGTC GTGGCCGGGA
AACATTCGAG AACTGCAAAA TGTCGTGCGT CGGACCCTGG TTTTTTCCAG CAATGACGAA
GTCACGGAGG CAGACATCGC GCTCATTGAT AACCAAGGCT ATGATTTCCA GTCGGAAGAG
GAGGGAACTG CCGAAGGTGA CGGATTGGAA CCCTACAGCC AAGCCAAGGA GCGCGTCTTA
CAAAGTTTTA CCACCGAGTA CATCCACGCC CTTTTGCAAA AAACCCGGGG CAATGTCTCC
CAGGCGGCCA AGTTAGCTGG GCTGAGCCGG GTCGCCCTGC AAAAAATCCT GCGCCGTACC
GCCGTCGACC CAAGAAACTA CCGGAATAGC TGA
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| Protein sequence | MARQLVLIID DELQMIQGLK RILEYELDDV DIHVCGDSEQ VLRQLLEHQY DLVLLDVCMP
GIGGMELLPK IKNLTPDITV IMMTAFGNVD LAVQSIKQGA SDFVCKPFEI PDLVAVLKRN
LKRQKLRSDQ DNWAESPLAA GLNAIVGQSK PVQDLLNLIS SVAKTDYSVL VRGESGTGKE
LVARAIHQLS PRGDKRFVTV NCPAIPEHLL ESELFGYKKG AFTGATQDKK GLFQEANGST
LLLDEVADIP ISVQTKLLRV LQEQEIRPLG SNKDLPVDVR ILSSTNQDLE YKLHTKAFRE
DLFFRLNVVT IKTPRLEEIP EDIPLLADFF TRQVCSELNI SPKPFSAQAI AALQQRSWPG
NIRELQNVVR RTLVFSSNDE VTEADIALID NQGYDFQSEE EGTAEGDGLE PYSQAKERVL
QSFTTEYIHA LLQKTRGNVS QAAKLAGLSR VALQKILRRT AVDPRNYRNS
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