Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1220 |
Symbol | |
ID | 8419048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1428505 |
End bp | 1430286 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645037795 |
Product | Uncharacterized protein family UPF0324 |
Protein accession | YP_003198086 |
Protein GI | 258405344 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000121334 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACC AGGATGACAG CCAGAGCACT GTTCGCGAAC AGCGCATGAG CATGTGGAAA CAATTGTACA AGACCGAGGA CTATTGGGCC ATTTGGTTGG CCGGCTTGTT TTTTGTGGTC GCGGTCGTTT GTGTCATGAC GTGGAAGCCG GCCGTTGAGG AGCTGCCGGA ATACCGTGCG ATCATGAACG AGGAGATGGA CAAGGCCGGA TTCCGGACCA TCGCGTATAC CGAAGCTGAA GATGCGATGG ATGGCATCCA GGCCAAAAAA GAGGGGTTCA CTTCGGTCAT CTATAATTTG ACCAATCGTC CCAAAGGGTG GACGAGCAAC CCGCTCAACT CGATCTACAT GAGTGAAGAA CAGGCAGCCA AAAAGCGCGC AGCTGCTGCC GATCGCTTTG AGGCGGCCAA AGAAGAACTC GCTCAGGCAC GGGCGGAGGC GGAAAAAGCT GAAGCCGCAG CAGCTGCTGC GAATTTTGAA GACAAGGAAC TCAACCAAAA GGCCAAGGCA TCCATCACGA AATGGCGTCA AGCCAAGTCG TCTCTGTCAT CGGCGAAAAG CGCCGCCACT GCCCAACCCT ACAACCTCAT CCCCAGCCTG ATCGTGCTCG GTATTGTGAT CATGCTCTTT TTCGCTATCG GGGCACGTTT TATCGGCATC AACCTCCGGG ATTTCTTTAA AGGATTCCCG GTTATTTTTG TCCTGGCCTG TATAGCCTAT TTGATCAGTA GTCAGGCCAC GCTGAAGGCA CTGGGACTTT CCTACGTGCT GTTTGCTCTG GCCTTGGGAT TGATCATTTC CAACACATTG GGCGTGGCCC GTTGGATCAA AACTGCCGGG CAAACCGAGT TCTTTATCAA AACCGGGCTT GTTCTGCTTG GGGCACGAAT CTTGATCGGG CAGATCGCCC TGATCGGGAT TCCCGGTATC TTTGTCACCT GGGTTGTGAC ACCTATTGTC CTGGTGACCA CATTCTGGTT TGGTCAGAAT GTGATCAAGA TGCCGTCCAA GGAACTGAAC ATCACCATGT CTTCTGATAT GTGCGTTTCT GGTGTGTCCG CGGCCATTGC CAGTGCCTCG GCCAGCGGTG CGAAAAAGGA AGAATTGACC CTGTCTATCG GCATGTCCAT GATCTTTGTG GCCGTGATGA TTTTTGCACT GCCCGCTATT GCGAACATGA CAGGCATGCA CCCGGTTTGG GCAGGCGCTT GGTTGGGTGG AACAGTGGAT AACACCGGAT CGGTTGTCGC CGCCGGTGAG TTGATCGGTA TGGAAGCCAT GTATGTGGCG GCCACGATTA AAATGATCCA GAATGTGATG ATTGGTGTGA TCGCTTTTGG CGTTGCCGCC TATTGGTGCT TGCGCGTCGA ACCGCAACGT GCCTGCAAGC CTGGCGAAAC GCCCATGAAG CTGACCGCCG GCGGGGCGCT GATGGAAGTC TGGTATCGCT TTCCCAAGTT TATCCTGGGC TTTATCGGCG CGTCGGTCAT TTTCTCGCTG ATGCAGACCG GTGTGAATAT GGATTGGGGC CAAGCCATGG TGAATGATGG AATCCTGGCC ATGGCAAACC GGTTCCGCGG TTGGTTCTTC TGCCTGGCCT TTGTCAGCAT CGGCTTGAGC ATCAACTACG GGGAACTCAA AGAGCCCTTG CGTGGTGGCA AGCCCTTGTT GCTGTATGTC TCCGGCCAGA CGTTGAACCT CATCTTGACT CTGTTCGTCG CCTGGCTCAT GTTTATGGTT ATTTTCCGCG ACATCACTGA TATGTTGATG GCCGGCGCCT AA
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Protein sequence | MANQDDSQST VREQRMSMWK QLYKTEDYWA IWLAGLFFVV AVVCVMTWKP AVEELPEYRA IMNEEMDKAG FRTIAYTEAE DAMDGIQAKK EGFTSVIYNL TNRPKGWTSN PLNSIYMSEE QAAKKRAAAA DRFEAAKEEL AQARAEAEKA EAAAAAANFE DKELNQKAKA SITKWRQAKS SLSSAKSAAT AQPYNLIPSL IVLGIVIMLF FAIGARFIGI NLRDFFKGFP VIFVLACIAY LISSQATLKA LGLSYVLFAL ALGLIISNTL GVARWIKTAG QTEFFIKTGL VLLGARILIG QIALIGIPGI FVTWVVTPIV LVTTFWFGQN VIKMPSKELN ITMSSDMCVS GVSAAIASAS ASGAKKEELT LSIGMSMIFV AVMIFALPAI ANMTGMHPVW AGAWLGGTVD NTGSVVAAGE LIGMEAMYVA ATIKMIQNVM IGVIAFGVAA YWCLRVEPQR ACKPGETPMK LTAGGALMEV WYRFPKFILG FIGASVIFSL MQTGVNMDWG QAMVNDGILA MANRFRGWFF CLAFVSIGLS INYGELKEPL RGGKPLLLYV SGQTLNLILT LFVAWLMFMV IFRDITDMLM AGA
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