| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1207 |
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| Symbol | |
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| ID | 8419035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1418863 |
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| End bp | 1419846 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645037782 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003198073 |
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| Protein GI | 258405331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.256273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCA CCGTCACCCG CGACGTCTTT GCCCTGGCTC AGGTGTTTAC CATTGCCCGT
GGCTCCCGCT CCGAGGCCGA AGTCGTGCGC GTGGAGATCG AACACGGCGG GGTCAGTGGG
CAGGGCGAGT GCGTTCCCTA TGCTCGCTAC GGGGAAACAG TGACCAGCGT CATGGACCAG
ATCCGCAAGC TTCCAACGCC TCTGTCCCGG CGACAGTTGC AAGACCTGCT GCCAGCCGGC
GCGGCCCGCA ACGCTGTGGA CTGTGCCCTG TGGGATCTGG AGGCCAAAAA GGCCGATGTG
CCGGTCTGGG TTCTGGCCGG CCTGCCGGAA CCCGTGCCGG AAGTGACCGC GTATACCCTG
TCTTTGGATG TGCCAGCAAA AATGCGCGAG CAGGCACGGC AAAACCGGGA CCGCGAGCTG
CTCAAGGTCA AACTCGGAGG GAAACAGGGG GACCTGGAGC GAATCCGGGC CGTGCGCGAC
GGCGCCCCGG AGCCACGAAT CATTGTGGAC GCCAATGAAG GGTGGACCCC GGCCATTTAC
CGGGAAATGA TTCCGGAACT CGCCCGTCTG GGGGTGGAGA TGGTCGAACA GCCCCTGCCA
GCCCACGATG ATGCGCCCTT AGTGGACCTG GAGCGGCCGC TGACCCTTTG CGCCGACGAA
TCTTGCCATG ACCGTTCTTC GCTCCCGAGC CTGCGGGGCA AATACGATAT GATCAATATC
AAGCTGGACA AGACCGGGGG GTTGACCGAG GCCCTGGCCC TCAGAGAAGC GGCGCTGGCC
GAGGGCTACC AGATCATGGT CGGGTGCATG CTGGGGTCAT CCCTGGCTAT GGCCCCGGCG
GTCCTGGTCG CCCAAGGCGC GGCGGTCACG GACCTCGACG GCCCGTTGCT GCTGGCCGAA
GACCGCGAGC CGCCACTGGA GTACGACACT GACGGCGTCC ACCCAGCGGA CGGGGAGTTG
TGGGGCGAAA CCGGGTCGGA ATGA
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| Protein sequence | MKITVTRDVF ALAQVFTIAR GSRSEAEVVR VEIEHGGVSG QGECVPYARY GETVTSVMDQ
IRKLPTPLSR RQLQDLLPAG AARNAVDCAL WDLEAKKADV PVWVLAGLPE PVPEVTAYTL
SLDVPAKMRE QARQNRDREL LKVKLGGKQG DLERIRAVRD GAPEPRIIVD ANEGWTPAIY
REMIPELARL GVEMVEQPLP AHDDAPLVDL ERPLTLCADE SCHDRSSLPS LRGKYDMINI
KLDKTGGLTE ALALREAALA EGYQIMVGCM LGSSLAMAPA VLVAQGAAVT DLDGPLLLAE
DREPPLEYDT DGVHPADGEL WGETGSE
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