Gene Dret_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1204 
Symbol 
ID8419032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1415918 
End bp1416442 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID645037779 
Productnitroreductase 
Protein accessionYP_003198070 
Protein GI258405328 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.460953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGT TTGAAGCCCT CTACACCCGG CGGAGCATTC GCAAATATAC CGATGCCCCG 
GTTAGTGATG AAGCGATTCG GGAACTGCTT GGCGCAGCCA TGATCGCGCC GAGCGCAGGA
AACGCCCAGC CCTGGCAGTT TGTGGTCATC AACGATCGTA CGATGCTGAC CAAATTGTCC
CAGGTCCATC CGTATGCCGG CATGGTCCAG CAGGCGCCGG TGTCGATTTT GGTCTGTGGC
GATCTGCGGC AGGAGAAATT CGCTGGCTAT TGGGTGGTCG ATTGTGCGGC GGCTGTGCAG
AATCTGTTGC TCGCGGCCCA CGGCCTCGGC CTTGGCGCGG TCTGGACCGG TCTGTATCCC
CAACAAGAAC GCATCGACGC CGTGCGGAGC ATTGTTGGGC TGCCCGAACA GATCATCCCC
CATTCGCTTA TCCCGGTGGG GCACCCGGCT GAATCGTCGA AGAAGGTAGA CCGCTTCAAA
GAGGAGCGGG TGCAGTATAA TGGATGGGAC AAAAAAGTGG TCTGA
 
Protein sequence
MELFEALYTR RSIRKYTDAP VSDEAIRELL GAAMIAPSAG NAQPWQFVVI NDRTMLTKLS 
QVHPYAGMVQ QAPVSILVCG DLRQEKFAGY WVVDCAAAVQ NLLLAAHGLG LGAVWTGLYP
QQERIDAVRS IVGLPEQIIP HSLIPVGHPA ESSKKVDRFK EERVQYNGWD KKVV