Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1204 |
Symbol | |
ID | 8419032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1415918 |
End bp | 1416442 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645037779 |
Product | nitroreductase |
Protein accession | YP_003198070 |
Protein GI | 258405328 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.460953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGT TTGAAGCCCT CTACACCCGG CGGAGCATTC GCAAATATAC CGATGCCCCG GTTAGTGATG AAGCGATTCG GGAACTGCTT GGCGCAGCCA TGATCGCGCC GAGCGCAGGA AACGCCCAGC CCTGGCAGTT TGTGGTCATC AACGATCGTA CGATGCTGAC CAAATTGTCC CAGGTCCATC CGTATGCCGG CATGGTCCAG CAGGCGCCGG TGTCGATTTT GGTCTGTGGC GATCTGCGGC AGGAGAAATT CGCTGGCTAT TGGGTGGTCG ATTGTGCGGC GGCTGTGCAG AATCTGTTGC TCGCGGCCCA CGGCCTCGGC CTTGGCGCGG TCTGGACCGG TCTGTATCCC CAACAAGAAC GCATCGACGC CGTGCGGAGC ATTGTTGGGC TGCCCGAACA GATCATCCCC CATTCGCTTA TCCCGGTGGG GCACCCGGCT GAATCGTCGA AGAAGGTAGA CCGCTTCAAA GAGGAGCGGG TGCAGTATAA TGGATGGGAC AAAAAAGTGG TCTGA
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Protein sequence | MELFEALYTR RSIRKYTDAP VSDEAIRELL GAAMIAPSAG NAQPWQFVVI NDRTMLTKLS QVHPYAGMVQ QAPVSILVCG DLRQEKFAGY WVVDCAAAVQ NLLLAAHGLG LGAVWTGLYP QQERIDAVRS IVGLPEQIIP HSLIPVGHPA ESSKKVDRFK EERVQYNGWD KKVV
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