| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1201 |
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| Symbol | |
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| ID | 8419029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1412408 |
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| End bp | 1413823 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037776 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003198067 |
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| Protein GI | 258405325 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGC AAACACACGC GGTCTGGAAT GTCCGCTTTT TGAATCAGAT CATGGATTCC
ATGGCCGAAG GGGTCTTCAC CCTCGACGTC CAAGGCCGGA TCACCTCCTG GAACAGGTCG
ATGGAGGACA TCACCGGCTA CAGCGCCTCA GAAGCCCTGG GCCGCTCCTG CCGGTTTCTG
GGGTTCAGCC ATTGTCTGGG CACGCTCTGC CCGGCTGATA TCCACCAGTG CGGCATCCTG
CGGCACGAAC AGCCCGAAGC CAAGGAATGT GTCCTGCGCC ATCGCGAGGG CCGGGATGTG
CCGGTCATCA AGCAGGCCCG AGTGGTCAAA GACGACAACG GAGAACTGAT CGGCATTGTC
GAGACCGTGA CCGACATGAC TGAACTCCAG AAGGCCCGGC ACAAGGCTGA AGAGGCAACC
CGACTGTTGG GGCAGCACTA CAGCCTTGGC AATATCATGG GCAAAAGCGA AGTCATGCAG
GAGGTCTTTT CCCGGGTCCG GGCCGCGGCC GCCAGCCGGT CCACCGTTCT CATCCAGGGG
GAAAGCGGGA CCGGGAAAGA ACTCATCGCC CGCGCCATTC ACTACAACAG CGACCAGGCC
GATCAGCCGT TCGTGACCGT CAATTGCTCG GCGCTGACGG AAACTCTTCT GGAAAGCGAG
CTTTTCGGGC ATGTCAAAGG GGCGTTTACC GGTGCTGTGC GCGACCGGGC CGGCCGCTTT
GAAGAAGCGC ATCGCGGATC GATTTTCCTG GATGAAATCG GGGAACTCAG CCAGACCATC
CAGGTCAAGC TGCTGCGCGT CCTGCAGGAA CGGGAAGTCG AACGGGTCGG CGACTCACAA
ACCCGCACGA TCGATATCCG GGTCATCGTG GCTACACACC GGGATCTCAA CGAGCTCTTG
GCCCAGGGCG TTTTTCGTCA GGACCTGTAT TACCGCCTCA AGGTTTTTCC TATCACCCTG
CCCCCATTGC GCCAGCGGCG CGAAGACCTG CCCCTGCTGG TCAACCACTT TATCGCCAAG
CAAAACGAAG CCACCGGAAA ACGGGTCACC GGCCTGGCAC CGGAGGCCAT GCGGCTGGTG
TTCGAGTACC ATTGGCCCGG CAATGTGCGT GAATTGGAAA ACGCCATCGA ACACGCCTTT
GTCCTGACTT CCGGGGAGCA GATCCAGGTC AACGATCTGC CGGCGGAGAT CATAACGCCC
CGGCCGAGCC CGGAAAGAGC CAGGGAAGCC GGCGTTCCCC GGACCGCTGG CAGCAGACAG
CACCATGAAC AGCCCGACCG GGAGCAGTTG CTCGCGCTGC TGGAGGCCAA CCAGTGGAAC
AAGGCCGCGG TGGCCCGGCA ACTCGGGGTG AGCCGGACGG CGGTGTGGAA GTACATGAAA
AAGTGGGGCA TTCCGCTGCA GCCGGAACCA GATTAA
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| Protein sequence | MTEQTHAVWN VRFLNQIMDS MAEGVFTLDV QGRITSWNRS MEDITGYSAS EALGRSCRFL
GFSHCLGTLC PADIHQCGIL RHEQPEAKEC VLRHREGRDV PVIKQARVVK DDNGELIGIV
ETVTDMTELQ KARHKAEEAT RLLGQHYSLG NIMGKSEVMQ EVFSRVRAAA ASRSTVLIQG
ESGTGKELIA RAIHYNSDQA DQPFVTVNCS ALTETLLESE LFGHVKGAFT GAVRDRAGRF
EEAHRGSIFL DEIGELSQTI QVKLLRVLQE REVERVGDSQ TRTIDIRVIV ATHRDLNELL
AQGVFRQDLY YRLKVFPITL PPLRQRREDL PLLVNHFIAK QNEATGKRVT GLAPEAMRLV
FEYHWPGNVR ELENAIEHAF VLTSGEQIQV NDLPAEIITP RPSPERAREA GVPRTAGSRQ
HHEQPDREQL LALLEANQWN KAAVARQLGV SRTAVWKYMK KWGIPLQPEP D
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