| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1194 |
|---|
| Symbol | |
|---|
| ID | 8419022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1405215 |
|---|
| End bp | 1406171 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645037769 |
|---|
| Product | Auxin Efflux Carrier |
|---|
| Protein accession | YP_003198060 |
|---|
| Protein GI | 258405318 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGT CCATCTTACT GACAACCTTT GAATCCGTGG CCCTGCTGCT GGGCATCGGC
GCCTTCGGGC TGTGGATCAT CAGCCGGCGC ATCCTGCCGC AGGAGGCATT GGGCACCCTG
TCCATTCTGG CTTTGGACAT CTCCCTGCCG AGCCTGGTTT TTGTGAACAT CCTCAAGAAT
TTCAAGCCGG CTGAATTTCC GGGTTGGTGG CTTCTGCCGG TCTGGTGGGC CGGTTTCACG
CTTTTCCAGG GCGCTTTGAC CGCGGTTTTG GCCTGGGTTT CCCAGCAGGA GACCCGCCGG
GAATTCGCTG TGAGCCTTTT TTTCCAAAAC GCTCTCTTTT TTCCCCTGGC CATTTTAATG
GGCATGTTCG GCCAGGATTC GACCTATATC GTGCAGCTCT TTTTCTTCAT GCTGCTTTTT
CCCTCATTGC TGTTCAGCAC CGCCCATCTT TTTTTCGGCA TCTCGCAGCA GACTTTTGCC
TGGTCCAAGA TCTTCAACAA GATCCTTTTG GCCACCATTC TGGCGACAAC ACTGCGCTTG
ACGGGCACGG AGGGCATTGT CCCGGGGTTC GTAGTCTCGG CCCTGGGCAT GATCGGGGAC
ATGACCATTC CGCTTTTGCT GATGATCCTC GGCGGCAATA TCTACGTCGA TTTCAAGCAC
AAAGGGAGCC TGTATCCGGT GGAGGTCGGG AAGTTCGTCC TGATCAAAAA TTTTCTGTTC
CCAGCCATTG CCCTCGGCGT GCTTGCCCTG ATTCAGCCTC CGTACCATAT TGCGTTGCTG
ATTATTTTGC AGGCCTCGGT TCCGCCGATC ACCGCCATTC CCATTTTGAC CGAGCGGGCC
GGCGGCAACC GGGAGATCGT GAACCAGTTC ATGTTCAGCA GTTTTGCGGT CTCACTGGTG
TCTATCCCCT TGATGATCGG TTTGTTTGGC ATGATTTTCC ATCTGCCGGC ACCATGA
|
|---|
| Protein sequence | MSLSILLTTF ESVALLLGIG AFGLWIISRR ILPQEALGTL SILALDISLP SLVFVNILKN
FKPAEFPGWW LLPVWWAGFT LFQGALTAVL AWVSQQETRR EFAVSLFFQN ALFFPLAILM
GMFGQDSTYI VQLFFFMLLF PSLLFSTAHL FFGISQQTFA WSKIFNKILL ATILATTLRL
TGTEGIVPGF VVSALGMIGD MTIPLLLMIL GGNIYVDFKH KGSLYPVEVG KFVLIKNFLF
PAIALGVLAL IQPPYHIALL IILQASVPPI TAIPILTERA GGNREIVNQF MFSSFAVSLV
SIPLMIGLFG MIFHLPAP
|
|---|
| |