Gene Dret_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1193 
Symbol 
ID8419021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1404505 
End bp1404912 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID645037768 
Producthypothetical protein 
Protein accessionYP_003198059 
Protein GI258405317 
COG category[S] Function unknown 
COG ID[COG4852] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTG CAACTGCCTT CAAAGTGTAC GGACTGATGA TTCCGGTGTT TTTCATCTTG 
GATATGCTCT GGCTCGGGGT GGTGGCCAAG GGGTTCTATC AGTCCAGACT GGCCGGTTTG
CTGAGCGAGA ACGTGAATTG GACGGCCGCT GTACTTTTTT ATCTGCTGTT TCTGGTCGGA
CTGTTGTTTT TTGTCGTCCT GCCGGCGGCG GACCGAGACT CCTTGCTCCA GGGGATCTTC
CGCGGCCTCT TCTTCGGGCT GATCACCTAC GCCACGTATG ATCTGACCAA TCTGGCCACA
TTGAAAAACT GGCCCCTGAC CGTGGCCCTG GTGGACATCG TCTGGGGAAT GGTGCTCTGC
GCTGCTGTGG GCACGGCAGG TGTCGGTTTC GCCCGGTGGT TTTCTTGA
 
Protein sequence
MPIATAFKVY GLMIPVFFIL DMLWLGVVAK GFYQSRLAGL LSENVNWTAA VLFYLLFLVG 
LLFFVVLPAA DRDSLLQGIF RGLFFGLITY ATYDLTNLAT LKNWPLTVAL VDIVWGMVLC
AAVGTAGVGF ARWFS