| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1180 |
|---|
| Symbol | |
|---|
| ID | 8419008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1386998 |
|---|
| End bp | 1387999 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 645037755 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003198046 |
|---|
| Protein GI | 258405304 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA TCATTCAGAT CCCCTGTTAT AATGAGGAAG ACACTTTGCC TTTGACCTTA
AGCGAGCTGC CACGGCATGT TCCGGGTTTT GAGGAGGTCG AGTGGCTAGT GATCAACGAC
GGGTCCATCG ACAAAACGGT CAAAGTAGCC AACGAGAACG GGGTAGACCA TGTCATCAGC
TATACCTCCA ACCGTGGGCT CGCTCATGCG TTTCGCATCG GTTTGCAGGC CTGCCTGGAC
AGGGGTGCAG ATGTGATTGT GCATACGGAT GCAGACAATC AATACGCCGC GAGCAGCATA
CCTGATCTGG TTTTACCAGT ACTTAGGGAC GAAGCTGATT TGGTAGTGGG GGACCGGCAG
GTCTGGAAAC ACCAGGAATT CGGATGGTCC AAAAAATTCC TACAAGATTT GGGCAGCAAA
GTGGTCAGCC ATCTGTCCCG GATTTCTGTA CCAGATGTCA CCAGCGGTTT CCGGGCCTTC
AGCCGGGAGG CGGCACTAAC CCTGAATGTA CTCAGCCGGT ATACCTATAC CCATGAGACG
ATTATTCAGG CTGGAATGCA AAATTTGAAG GTGGTTTCTG TTCCAGTCAA AGTCAATCCG
GCCACACGTC CGAGCCGACT GTTCCGTTCT CAAACTGCTT ATGTCCTTCG CAGCGCCGCC
ACCATCCTGC GGGTCTATAC CATGTATCGG GCCCTACGAG TCCTTTTGAC CATTGCCACA
CCCATTTTCT TGGCCGGATT CGGGCTGGGA ATTCGATTTT TGTATTTTTA CATGACGGGA
AACGGAAGTG GCCACATCCA GTCCCTTATA CTCTGTGCCG TACTCCTTAA TCTTAGCTTT
TTCCTGGCCC TCATTGGCAT TTTGGCAGAT TTGATTGGTT GCAACAGACG AATACTTGAG
GATTTGCTTT TGCGCGTCAG GTTAAACGGA AGTATTATTA CTATAGATAA GACGTCGTCT
CGAATAAGTG ATAAGAAAAA GACAATAAAG TATTATAAGT GA
|
|---|
| Protein sequence | MKLIIQIPCY NEEDTLPLTL SELPRHVPGF EEVEWLVIND GSIDKTVKVA NENGVDHVIS
YTSNRGLAHA FRIGLQACLD RGADVIVHTD ADNQYAASSI PDLVLPVLRD EADLVVGDRQ
VWKHQEFGWS KKFLQDLGSK VVSHLSRISV PDVTSGFRAF SREAALTLNV LSRYTYTHET
IIQAGMQNLK VVSVPVKVNP ATRPSRLFRS QTAYVLRSAA TILRVYTMYR ALRVLLTIAT
PIFLAGFGLG IRFLYFYMTG NGSGHIQSLI LCAVLLNLSF FLALIGILAD LIGCNRRILE
DLLLRVRLNG SIITIDKTSS RISDKKKTIK YYK
|
|---|
| |