Gene Dret_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1176 
Symbol 
ID8419004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1381119 
End bp1381877 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID645037751 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_003198042 
Protein GI258405300 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00428449 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG CGGTCAGCGT CACCCTCAAG GAGAACCTCC AGAGCCTGAA CCTCTCCCAG 
ATGGCCAAGG AATTGGAGTC CTTTCTGCGG CAGGCTCGCG AATCGGGCAT GGACTATGCC
GAGCTGCTTT TGCAGATGAC TGACCATGAA ATGCGGATTC GGGCTGACAA CCGGCTCAAG
CGCCGCCTCA AAGAAGCCAA GTTCCCTTTG ATCAAGACCA TAGAGGGGTT TGACTTTGAG
ATCACTGCCG ACCTGGACAG GCGGCTGATC CGGGAGCTTT GCAGCGGCGA ATATGTCAAA
GAGCACAAAA ACGTAATCTT CCTGGGCAAA AGCGGTACAG GCAAAACCCA TCTGGCCACA
GCCCTTGGTG TGGAGGCCTG TCGCCAGGGA GTCCGCACTC GATTTGTCAC AGCCTGCGGC
CTGGTCAACG AACTCATCGA GGCCCGGCAG GAAAAGGATC TGCAGCGCAT CCTCAAGCGC
TATGGTCGCT ATGGGCTGCT CATCCTCGAT GAGCTGGGGT ACATACCCTT TTCCCAGGAA
GGGGCGGAAC TGCTGTTTCA GGTGCTTGCT GAGCGCCATG AACGCGGTTC TGTGATCATC
ACCAGCAATC TCGGCTTTGG GGACTGGACC CAGGTTTTTG GCGACGCCAA CCTGACAGCA
GCCCTTCTTG ACCGGCTCAC CCACAAGGCC CACATCATTG AGTGTTCTTG GCAGAGCTAC
CGGCTACAGG AGGCGCTGCA AGGCCAGGCA AACAACTAA
 
Protein sequence
MNPAVSVTLK ENLQSLNLSQ MAKELESFLR QARESGMDYA ELLLQMTDHE MRIRADNRLK 
RRLKEAKFPL IKTIEGFDFE ITADLDRRLI RELCSGEYVK EHKNVIFLGK SGTGKTHLAT
ALGVEACRQG VRTRFVTACG LVNELIEARQ EKDLQRILKR YGRYGLLILD ELGYIPFSQE
GAELLFQVLA ERHERGSVII TSNLGFGDWT QVFGDANLTA ALLDRLTHKA HIIECSWQSY
RLQEALQGQA NN