Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1165 |
Symbol | |
ID | 8418993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1370136 |
End bp | 1370567 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645037740 |
Product | TadE family protein |
Protein accession | YP_003198031 |
Protein GI | 258405289 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0463265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGCA AAATGAAATT TTCAAATCAA CGCGGAGCAG CCGCAGTAGA ATTTGCCATT GTACTGCCTC TCCTTGTCTT GATTTTTGCG GGCATTACAG AATTTGGGAT CGCCTATTAT AACAAGCAGG TAATTACTAA TGCAAGCAGA GAGGGTGCAA GGGTAGGGAT GTCTAACGTT GATCCTCAAG ACATTCGAAA TATCGTTTAT CCATATGCCA AAGACAGACT GCTCACCTTT GGCCCAGATA GCTTTTCAAG TGATTCAAGC AGTATAAATA TAAATGGATG CAATTCGACA TCTGACTATT GCAAGGTAGA GGTTGTTTAT AACTATACTT ATCTAGTACT CCAAGTTTTT GATTTTTTTG GTGCTAATTT TGATAAAGAT TTAGATATTA AAGCCGCAAC AACAATGAAA ATGTTACCAT AA
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Protein sequence | MLSKMKFSNQ RGAAAVEFAI VLPLLVLIFA GITEFGIAYY NKQVITNASR EGARVGMSNV DPQDIRNIVY PYAKDRLLTF GPDSFSSDSS SININGCNST SDYCKVEVVY NYTYLVLQVF DFFGANFDKD LDIKAATTMK MLP
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