Gene Dret_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1163 
Symbol 
ID8418991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1368710 
End bp1369681 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID645037738 
Producthypothetical protein 
Protein accessionYP_003198029 
Protein GI258405287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.724122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AGATTTTGGA TAATGCGATT CTAAGAGATG AATGTGGTTC AGTAGCCATC 
ATAACTGCTT TATTTGTTCT TTTCAGTTTA CTTGCCACGG CAGGAATAGC AATAGATATT
GGAAGGCAAG CCACGGCAAA AAATGAGCTG CAAAACACAC TCGATGCTGC AGCTCTTGCT
GGTGCCATTG AGCTAGGACA AAATGGTCCC GCAAATGTAA AAAGTGAAGC TAAAGAGGCG
GCAGAAAATA ATTCTATAGA CAACAATGGC TTGATTCTTG GTGATAATGA TATAAAAGTT
GGCAATTGGA CAGAACCTAA CTTTTTTAGC AAAACTCCTT ATAATTCTGT AAAAATTATG
GTGAACAATC ATAGTATCAA CTCTTTTTTT GCCTCTGCTT TAAATTTCCA GCAGACGGTT
AGCGCAGAAG CTACAGCAGT AATAGGTCCT TTATCTGGAA AGCGTCATTT GATCCCAATT
GCTGTTACAG AAGATGAAGC TGATACCATG AGCGAAGCAG GAGAAGGAAT AATCTATCAA
TTTGGGAGAA GTGCAGGAAA CTGGGGGACA GTAGATTTCG ATGCTTATAT CGATGGAGAT
CAAGGAGGAG GTAATCCTGA AATAGGTGAA TGGTTAGAAA ATGGATATAA TGGAACAATA
CGCATTGGTG ATGATATAAA TACAGAATCT GGTGTCGGTA AGATAGTTGG CGGTAACAAT
GGTCAAAAAG TGGAAAACTT GATTGGGCAA AAAATATTTA TACCTGTAGT GAATGAGTTT
GGTCAAGGTA GCACACCAGG AGTACCTTCT ACTGTTATGG GGTTTGTGGC TATTGAGATT
ACTGCCTTAA CTGGTAATGG GGCAAATACT CAGATAAGCG CAAAGTATCT TGGGACTGAA
GTTTCGTCAG GACCAGTAGA TTTAGATTTA AATGATAGCT ATGGACCAAT TGGTGTTGTT
TTAGTTCAAT AG
 
Protein sequence
MKIKILDNAI LRDECGSVAI ITALFVLFSL LATAGIAIDI GRQATAKNEL QNTLDAAALA 
GAIELGQNGP ANVKSEAKEA AENNSIDNNG LILGDNDIKV GNWTEPNFFS KTPYNSVKIM
VNNHSINSFF ASALNFQQTV SAEATAVIGP LSGKRHLIPI AVTEDEADTM SEAGEGIIYQ
FGRSAGNWGT VDFDAYIDGD QGGGNPEIGE WLENGYNGTI RIGDDINTES GVGKIVGGNN
GQKVENLIGQ KIFIPVVNEF GQGSTPGVPS TVMGFVAIEI TALTGNGANT QISAKYLGTE
VSSGPVDLDL NDSYGPIGVV LVQ