Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1163 |
Symbol | |
ID | 8418991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1368710 |
End bp | 1369681 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 645037738 |
Product | hypothetical protein |
Protein accession | YP_003198029 |
Protein GI | 258405287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.724122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA AGATTTTGGA TAATGCGATT CTAAGAGATG AATGTGGTTC AGTAGCCATC ATAACTGCTT TATTTGTTCT TTTCAGTTTA CTTGCCACGG CAGGAATAGC AATAGATATT GGAAGGCAAG CCACGGCAAA AAATGAGCTG CAAAACACAC TCGATGCTGC AGCTCTTGCT GGTGCCATTG AGCTAGGACA AAATGGTCCC GCAAATGTAA AAAGTGAAGC TAAAGAGGCG GCAGAAAATA ATTCTATAGA CAACAATGGC TTGATTCTTG GTGATAATGA TATAAAAGTT GGCAATTGGA CAGAACCTAA CTTTTTTAGC AAAACTCCTT ATAATTCTGT AAAAATTATG GTGAACAATC ATAGTATCAA CTCTTTTTTT GCCTCTGCTT TAAATTTCCA GCAGACGGTT AGCGCAGAAG CTACAGCAGT AATAGGTCCT TTATCTGGAA AGCGTCATTT GATCCCAATT GCTGTTACAG AAGATGAAGC TGATACCATG AGCGAAGCAG GAGAAGGAAT AATCTATCAA TTTGGGAGAA GTGCAGGAAA CTGGGGGACA GTAGATTTCG ATGCTTATAT CGATGGAGAT CAAGGAGGAG GTAATCCTGA AATAGGTGAA TGGTTAGAAA ATGGATATAA TGGAACAATA CGCATTGGTG ATGATATAAA TACAGAATCT GGTGTCGGTA AGATAGTTGG CGGTAACAAT GGTCAAAAAG TGGAAAACTT GATTGGGCAA AAAATATTTA TACCTGTAGT GAATGAGTTT GGTCAAGGTA GCACACCAGG AGTACCTTCT ACTGTTATGG GGTTTGTGGC TATTGAGATT ACTGCCTTAA CTGGTAATGG GGCAAATACT CAGATAAGCG CAAAGTATCT TGGGACTGAA GTTTCGTCAG GACCAGTAGA TTTAGATTTA AATGATAGCT ATGGACCAAT TGGTGTTGTT TTAGTTCAAT AG
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Protein sequence | MKIKILDNAI LRDECGSVAI ITALFVLFSL LATAGIAIDI GRQATAKNEL QNTLDAAALA GAIELGQNGP ANVKSEAKEA AENNSIDNNG LILGDNDIKV GNWTEPNFFS KTPYNSVKIM VNNHSINSFF ASALNFQQTV SAEATAVIGP LSGKRHLIPI AVTEDEADTM SEAGEGIIYQ FGRSAGNWGT VDFDAYIDGD QGGGNPEIGE WLENGYNGTI RIGDDINTES GVGKIVGGNN GQKVENLIGQ KIFIPVVNEF GQGSTPGVPS TVMGFVAIEI TALTGNGANT QISAKYLGTE VSSGPVDLDL NDSYGPIGVV LVQ
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