| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1160 |
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| Symbol | |
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| ID | 8418988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1364914 |
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| End bp | 1365885 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645037735 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003198026 |
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| Protein GI | 258405284 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCT ACATAATCGC ATTGATCATT TTTGTCGTCT CTATCATGAT TCTGGAGATG
TTTCTCTACG CCCTGCGGAC CATCAAGAAT CCGGATCGGT CCCAAATCCG TAAAAAACTG
CGCAAGGTGA CCTACAATCC CAAGCTGGAT GATGCTCCCC AGGACATCGA GCGCAAAATA
GTCTTCAGCG AGATCAAGAT CCTGGATGCC ATTTTGCGCC GCATATCCAT CACAGATCGG
CTGCACAGGC TCCTGTATCA GGCCAACGCT CAGTATCCGG TCGGATTTTA CATTATCCTC
TCCCCCCTTC TGGGGCTTGC GCTCGTTATG TTGCTCGAGT TCTTCGGCTA CGCCGTATAC
GTCTCCCTCC CCGTCGGCTT ACTCGGAGCC CTCACTCCCT TTTTCTACCT CAAGCGCAAG
AAGTTAAAGA GGATGCGCAA ATTCATGGCC CAGCTTCCCG AGGGCTTGGA CCTTTTGGCC
AGATCCCTGA AGGCTGGTCA TGCCTTTACC ACCGGCATGA AGCTGGCTGC GGAAGAGTTT
GGCGACCCGT TGGGGCCTGA ATTCGATGTG GCTCTTGACG AGATCAACTT TGGCGTCCCG
GTTCCGGATG CCTTGCGCAA GATGACCTAC AGGGTGGATT GTCCGGATCT GAACTTCTTT
GTTGTCGCCG TCATCATGCA GCGGGAGACT GGTGGCAACC TGGCAGAAAT CATTGAGAGC
ATCGCCACCC TGATCCGGGA ACGTTTCAAA TTCTTCGGCA AGGTCAAGGC TCTGGCTGCC
GAAGGCGTTC TCTCCATGTG GGTGCTGATC GGGCTCCCCT TTGCCATCGT AGGTATTTTG
ACTTTTATGA ATCCGGAATA CATCACTTTG CTCTTTGAGG AGACCATGGG ACACATCATG
ATCGCCGGAG CCTTGATCAT GATGATCATC GGGTATTTTT TCATGCGCAA CATCGTCAAA
ATCGATGTGT AG
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| Protein sequence | MNIYIIALII FVVSIMILEM FLYALRTIKN PDRSQIRKKL RKVTYNPKLD DAPQDIERKI
VFSEIKILDA ILRRISITDR LHRLLYQANA QYPVGFYIIL SPLLGLALVM LLEFFGYAVY
VSLPVGLLGA LTPFFYLKRK KLKRMRKFMA QLPEGLDLLA RSLKAGHAFT TGMKLAAEEF
GDPLGPEFDV ALDEINFGVP VPDALRKMTY RVDCPDLNFF VVAVIMQRET GGNLAEIIES
IATLIRERFK FFGKVKALAA EGVLSMWVLI GLPFAIVGIL TFMNPEYITL LFEETMGHIM
IAGALIMMII GYFFMRNIVK IDV
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