Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1159 |
Symbol | |
ID | 8418987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1363773 |
End bp | 1364735 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645037734 |
Product | Type II secretion system F domain protein |
Protein accession | YP_003198025 |
Protein GI | 258405283 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCTG ACTACCTTCC CTTGATCATG GCCGGGGCAA TTTTTGTGTC CCTTTTTCTG CTCATGATCG GGGTTATGCA GCTTGTCCGC TCCAACTCCA AAAAGCGGGC CATTCTGGAA AAAATCCAGA CTTCGAATCA GCAGAGCGCC TTTGGGGACC CGCAGCGCCT GGACTCTTCC CGATCCGGCT TTTTTGGTAA AATATTCGGC TTTGTAGGTC TTGTTGGCCA AAAGGTGGCC AAAGACAGAG TCTCTGATCA CACCGTGCTC CGTCCCAGAT TCCTCAAGGC CGGGATCCGG TCTCCTCTGG CCCCGGCGGT TTTTTGGGGT CTGAAGGTGA TTATGCCACT CGCTCTCCCC CTCTGCTTCG GTCTTTTTTA TTATTTGATC CCGGATTTGA CCCTTTCTCC AACCAACACG CTCCTCATCA TCACTGTTTT GGCTGTGGCC GGCTTTTATG TCCCCGACCT GTGGCTGACC AACAAACGAC AGAAACGGCG GCAGACCATT CTTAAAGGAT TTCCAGACGC CCTGGATCTT ATGGTGGTTT GCGTTGAGGC AGGCATGGGC CTGGATGCGG CCATCAGCAG AGTGGCCAAG GAATCAAAAT CCAACAACGC GACTCTCAGT GAAGAACTGC ATTTTTTCAC CCTGGAGACC AGGGCCGGCA TGCCCCGTAA GGATGCGCTC AAGAATCTGG CCATGCGCAC AGACCTGCAG CAAATGCAGA ATCTGACCAC CCTGCTCATT CAGACCGAAA AATTCGGCAC CAGTGTGAGC CAGGCCTTGA AGGTATTTTC CGAAAGCATG CGCACCGAAC GGTTCCAAAG AGCTGAGGAA AAAGCAGCCA AGATCCCGGT CAAGCTGTTG TTTCCGCTTA TCATGTTCAT TTTTCCCTCG CTGTTCGTGG CTATTCTGGG GCCGGCGGTG ATTCGCATTT CCCAGACTCT GCTCAATATG TAG
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Protein sequence | MPADYLPLIM AGAIFVSLFL LMIGVMQLVR SNSKKRAILE KIQTSNQQSA FGDPQRLDSS RSGFFGKIFG FVGLVGQKVA KDRVSDHTVL RPRFLKAGIR SPLAPAVFWG LKVIMPLALP LCFGLFYYLI PDLTLSPTNT LLIITVLAVA GFYVPDLWLT NKRQKRRQTI LKGFPDALDL MVVCVEAGMG LDAAISRVAK ESKSNNATLS EELHFFTLET RAGMPRKDAL KNLAMRTDLQ QMQNLTTLLI QTEKFGTSVS QALKVFSESM RTERFQRAEE KAAKIPVKLL FPLIMFIFPS LFVAILGPAV IRISQTLLNM
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