| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1152 |
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| Symbol | |
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| ID | 8418980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1352416 |
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| End bp | 1354692 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037727 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003198018 |
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| Protein GI | 258405276 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC AATCTCCGCA TGCCGAATTG CGCCAGCGTA TTGCAGAATT GGAACAAGCA
GAGGCTGCCC ACCGAGAAAC GGAAGCGGCA TTACGGGCAA GCAATGAGCG TTTCCAATTG
GCGATGCAGG TATGCCAAGA GGGCGTTTGG GACTGGGACA TTGTTACCGA TGTGGTGTAT
TATAGCCCCG CCTATGCGAC GATGCTCGGG TATGATCCCC AGGAATTGCC GGACCGTGTA
GATGTCTGGG AAGGATTGAT GCACCCCGAT GATAAACAGG CCGCACTGCG AGCAAACCGT
GATTGTATAG AAAACCGCTG TCAGGAATTT ACTGTGGAAT TCCGGATGCG CTCTAAACAG
GGGCAGTGGC TCTGGATTCT CGGTCGAGGG AAAGCTGTGA GCCGCGATGG TGATGGACGG
GCGCTGCGGT TGGTGGGCAC CCATACAGAC ATCTCAGAGC GCAAACGCAT GGAAGAGGCC
TTGGAAAAGC GTATCATCGC CTTGACCCGG CCTGTCTCCC AAAACACCTC CATAGCCATA
GACGAATTGT TTGATGTGGA GGCCTTGCAG CGCTTCCAGG ATGAATTCGC GGCCGCCACC
AATGTGGCTT CGCTCATCAT TTTCCCCGAT GGATCTCCGG TGACCCAACC CTCAAATTTT
ACCCGCCTGT GCAACGATAT CATTCGAAGA ACAGAGAAAG GGTGCGCCAA TTGTCACAAA
TCGGGCATGC TCTTGGGCGC CCCCCATCCC GAAGGACCAA TTGTGCAGCC GTGCCTCAGC
GGAGGACTCT GGGACGCCGG AGCCAGCATC ACCCTCTGTG GCCAGCACAT CGCCAGTTGG
CTCGTGGGCC AAGTTCGTGA TGCGGGCCAA ACCGAAGAGG GTATACGGGC CTATGCCCGG
GAAATCGGCG CTGATGAACA GGAGTGTGTT GACGCCTTCT ACGAAGTCCC CGTTATGTCT
CACAACCAAT TTCAGAAAAT AGCCCAAGCC TTGTTTACCA TGGCCAATCA GCTTTCGAGC
ATGGCGTACC AGAATGTGCA GCAGGCCCGA TTCATCACCG AACGACAGGA TGCAGAAGCC
GAACAGGAAA AGCTTCAAGC CCAATTAACC CAGGCCAAAA AGATGGAATC TGTGGGCATA
TTGGCTGGAG GCTTGGCTCA TGATTTCAAT AATTTGCTCC ACGCCATTCG CGGGAATCTC
GATCTTCTGG GCCACAATAA ACCTGAAGCT CACCCGGACC AACAGCGTTT AGCCACTATC
CGATCATCAA TCAGGCGCGC CGAGCGACTG GTGCAGCAAC TATTGCTTTT CAGCCGCAAA
GCCGACAGCC GCAAACAGAA TCAGGATATC AACCAAGTGG TGCAGGAGAG TGCGCGCATG
TTGGAAAGTT CGATCCCCAA AATGATCGAA ATCGAACTCA CCCTGGGCCA GGGATTGCCG
CTGGTGTATG CTGATATTGT GCAAGTGGAG CAAGTCGTGC TCAATTTGGG CCGCAACGCG
GAAAGCGCCA TGCCGCAGGG AGGCAGGCTA ACAATCGAAA CCCACTATGC TGAACTGGAC
GAGGAGTTTG TCCGGATGCA TCCCGGATCG AAGACCGGGC CCCATGTCCT GCTCATCATT
TCCGATACCG GTCATGGTAT GGATGAAGAA ACCCGGGCCC GCGCTTTTGA GCCTTTTTTC
ACCACAAAAG AGGTTGGACA GGGGTCTGGG CTCGGCCTTG CTTCCGTTTA CGGGATAGTG
AAATCCCATG AGGGGTATAT CCAATGTGAT AGCGAAAAAG GGCAGGGGAC CACGTTCCGA
GTCTATTGGC CGGCGAATCC CGATGCTGAG ACCAAACCCG TTCGGAAGAA TCGCTGGGAA
TCCCCTTCGA AGATAGAAGG ATCGGAAACG GTATTGGTGG TCGATGACGA AGATGTAATT
CTTGAAATAA CAGTCGAAAT TTTGGAAATG CACGGATATA CAGTCTTGAC GGCTCGCAGC
GGAGAAGAGG CGCTGTCCTT GTATGCCGAA AATGGCCATA CCGTGGATCT GGTAATCCTG
GATTTGAATA TGCCCGGCAT GGGAGGTGCT CAATGCCTGC AGCATCTGCA GCAGTACCAT
CACCCTCCAC GTGTGCTTTT AGCCAGCGGT TATTCGGCCC ACGGATCGGT CCAGGAGGTG
GCCAGAAGCG CAGCTGGATT TATCCCCAAG CCCTACCATC TCACGGAATT ACTGGCCAAA
ATCCGGGAAG TATTGGATCG CGATACGCAA GAGCCTACTG GAGGAAATCC ATTGTAA
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| Protein sequence | MSAQSPHAEL RQRIAELEQA EAAHRETEAA LRASNERFQL AMQVCQEGVW DWDIVTDVVY
YSPAYATMLG YDPQELPDRV DVWEGLMHPD DKQAALRANR DCIENRCQEF TVEFRMRSKQ
GQWLWILGRG KAVSRDGDGR ALRLVGTHTD ISERKRMEEA LEKRIIALTR PVSQNTSIAI
DELFDVEALQ RFQDEFAAAT NVASLIIFPD GSPVTQPSNF TRLCNDIIRR TEKGCANCHK
SGMLLGAPHP EGPIVQPCLS GGLWDAGASI TLCGQHIASW LVGQVRDAGQ TEEGIRAYAR
EIGADEQECV DAFYEVPVMS HNQFQKIAQA LFTMANQLSS MAYQNVQQAR FITERQDAEA
EQEKLQAQLT QAKKMESVGI LAGGLAHDFN NLLHAIRGNL DLLGHNKPEA HPDQQRLATI
RSSIRRAERL VQQLLLFSRK ADSRKQNQDI NQVVQESARM LESSIPKMIE IELTLGQGLP
LVYADIVQVE QVVLNLGRNA ESAMPQGGRL TIETHYAELD EEFVRMHPGS KTGPHVLLII
SDTGHGMDEE TRARAFEPFF TTKEVGQGSG LGLASVYGIV KSHEGYIQCD SEKGQGTTFR
VYWPANPDAE TKPVRKNRWE SPSKIEGSET VLVVDDEDVI LEITVEILEM HGYTVLTARS
GEEALSLYAE NGHTVDLVIL DLNMPGMGGA QCLQHLQQYH HPPRVLLASG YSAHGSVQEV
ARSAAGFIPK PYHLTELLAK IREVLDRDTQ EPTGGNPL
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