Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1145 |
Symbol | |
ID | 8418972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1341789 |
End bp | 1342499 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645037719 |
Product | phosphatidylcholine synthase |
Protein accession | YP_003198011 |
Protein GI | 258405269 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1183] Phosphatidylserine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCA GTAAAAAATT GTGGGCTGCG GGCACGCATC TGTACACCAT GAGCGGGGTT CTGTTTTCCC TCTGGGCCAC GATTGCCCTG ATCGAAAAGG ACATCGGTGC CTTTCTCCTG GCCCTGTTTC TGGCTGTAGT GGTCGATGCC ACGGACGGCA CAATGGCCCG CCGCCTGGGG ATCAAAGAGA TTTATCCCAA TTTCGATGGG GCGAAACTCG ACGATCTCAT TGATTACCTG ACCTTTGTCT TTTTGCCATG TATGGGGCTC ATCCAATTCG GGATCCTTGA ACCGGGCTGG AACTGGGTCG CGGCCGTGCC CATGCTGGCC AGCCTCTACG GGTTTTGCCA GGATAACGCC AAGACCGAGG AATCTTTCGT CGGCTTCCCC TCGTATTGGA ATCTTGTCTT TCTGTATCTG TATGTCCTTG AATTCCCGAA CACAATGGCC ATCGGAGTGC TGTTGTTCTT CTCATTGCTT ATTTTCGTTC CCCTGCACTA CATTTATCCG ACCAAAACCC GGTTCATGAA GCGGACCACG ACGCTGCTTT CTATCGGGTA CGGCCTCCTG GTGGCCTATG TCTGTCTTTT CCCCAACACG CCCTCGGCTG ACACCGCTGC CGGAATGTCG CTGGTCTTTC CGGCCTATTA TATGAGTCTT TCTATTATCC ACCATTTTCG CGTGACCAGG GGGGAGCGTG AAGGGGCGTA G
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Protein sequence | MLTSKKLWAA GTHLYTMSGV LFSLWATIAL IEKDIGAFLL ALFLAVVVDA TDGTMARRLG IKEIYPNFDG AKLDDLIDYL TFVFLPCMGL IQFGILEPGW NWVAAVPMLA SLYGFCQDNA KTEESFVGFP SYWNLVFLYL YVLEFPNTMA IGVLLFFSLL IFVPLHYIYP TKTRFMKRTT TLLSIGYGLL VAYVCLFPNT PSADTAAGMS LVFPAYYMSL SIIHHFRVTR GEREGA
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